Gene VIBHAR_05331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05331 
Symbol 
ID5556516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp563584 
End bp564426 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content42% 
IMG OID640909808 
Producttranscriptional regulatory protein CpxR 
Protein accessionYP_001447463 
Protein GI156976557 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTTTT GTAGAGAGCG CTTTTTTATA AATGTATGGT TTGTAAGTGT TTGTAAGCAC 
TTTCTGTCGC TAGAGGTTCG GTTTATATGG GTTGCATGGA ACAAAACGAG CGATATACTG
CCTCTGTTTT ATAGGTTGGG TGAATGGATT ATGGTCGGTA ATAAAATTTT GCTCGTAGAG
GACGATTCAG AGATTGCTCG ATTAACCAAA ATGTACCTAG AGGCTGAAGG TTACCTAGTT
ACTGTTCTCG ACAATGGTCT TAATGCACTC GACGCTATCA AAGAATTGAA GCCTGATCTG
GTGTTATTGG ATTTGATGCT CCCAGGCAAA AATGGTGCAG AGATATGCCA AGAGGCTAGG
GCATTTTATC ATGGAATAAT CATTGTGTTG ACGGCCACTG ATGATGAGAT GAGTGAAGTT
AGCCTATTTA AATTTGGTGC TGATGATTAC CTAACGAAAC CAATTAAGGG CAATATCCTC
CTCGCTCGTA TTGAGGCCTC TTTACGCCGT TACCGTCGCC AAATAGATTC GGATGAAAAG
ACAGAGCTGA GCCGTTATGG CATCGACTTA TGCACCCGTC GCTCTAAAGC TTATTACTTA
GAGCAAGATA TCGATCTCAC TGATTCTGAG TTCGAAATAT TGGAGCTATT AATGCTCAAT
GTTGATAAAC CCGTTTCTCG AGAGTCCTGT TGCCGCCTTG CGCGTGGCAT TGAATACTGC
ATTACTGACC GTTCAATTGA TATGCGAATC TCTTCTTTGA GGAAAAAATT CTCAAAAGCC
CTTATTCACA CCGCTACCAT TAAGACCGTG CGTAATCGTG GATACATGTT AACGGGGAAA
TAG
 
Protein sequence
MFFCRERFFI NVWFVSVCKH FLSLEVRFIW VAWNKTSDIL PLFYRLGEWI MVGNKILLVE 
DDSEIARLTK MYLEAEGYLV TVLDNGLNAL DAIKELKPDL VLLDLMLPGK NGAEICQEAR
AFYHGIIIVL TATDDEMSEV SLFKFGADDY LTKPIKGNIL LARIEASLRR YRRQIDSDEK
TELSRYGIDL CTRRSKAYYL EQDIDLTDSE FEILELLMLN VDKPVSRESC CRLARGIEYC
ITDRSIDMRI SSLRKKFSKA LIHTATIKTV RNRGYMLTGK