Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05331 |
Symbol | |
ID | 5556516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 563584 |
End bp | 564426 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640909808 |
Product | transcriptional regulatory protein CpxR |
Protein accession | YP_001447463 |
Protein GI | 156976557 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTTTTTT GTAGAGAGCG CTTTTTTATA AATGTATGGT TTGTAAGTGT TTGTAAGCAC TTTCTGTCGC TAGAGGTTCG GTTTATATGG GTTGCATGGA ACAAAACGAG CGATATACTG CCTCTGTTTT ATAGGTTGGG TGAATGGATT ATGGTCGGTA ATAAAATTTT GCTCGTAGAG GACGATTCAG AGATTGCTCG ATTAACCAAA ATGTACCTAG AGGCTGAAGG TTACCTAGTT ACTGTTCTCG ACAATGGTCT TAATGCACTC GACGCTATCA AAGAATTGAA GCCTGATCTG GTGTTATTGG ATTTGATGCT CCCAGGCAAA AATGGTGCAG AGATATGCCA AGAGGCTAGG GCATTTTATC ATGGAATAAT CATTGTGTTG ACGGCCACTG ATGATGAGAT GAGTGAAGTT AGCCTATTTA AATTTGGTGC TGATGATTAC CTAACGAAAC CAATTAAGGG CAATATCCTC CTCGCTCGTA TTGAGGCCTC TTTACGCCGT TACCGTCGCC AAATAGATTC GGATGAAAAG ACAGAGCTGA GCCGTTATGG CATCGACTTA TGCACCCGTC GCTCTAAAGC TTATTACTTA GAGCAAGATA TCGATCTCAC TGATTCTGAG TTCGAAATAT TGGAGCTATT AATGCTCAAT GTTGATAAAC CCGTTTCTCG AGAGTCCTGT TGCCGCCTTG CGCGTGGCAT TGAATACTGC ATTACTGACC GTTCAATTGA TATGCGAATC TCTTCTTTGA GGAAAAAATT CTCAAAAGCC CTTATTCACA CCGCTACCAT TAAGACCGTG CGTAATCGTG GATACATGTT AACGGGGAAA TAG
|
Protein sequence | MFFCRERFFI NVWFVSVCKH FLSLEVRFIW VAWNKTSDIL PLFYRLGEWI MVGNKILLVE DDSEIARLTK MYLEAEGYLV TVLDNGLNAL DAIKELKPDL VLLDLMLPGK NGAEICQEAR AFYHGIIIVL TATDDEMSEV SLFKFGADDY LTKPIKGNIL LARIEASLRR YRRQIDSDEK TELSRYGIDL CTRRSKAYYL EQDIDLTDSE FEILELLMLN VDKPVSRESC CRLARGIEYC ITDRSIDMRI SSLRKKFSKA LIHTATIKTV RNRGYMLTGK
|
| |