Gene VIBHAR_05250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05250 
Symbol 
ID5557139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp499583 
End bp500497 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content45% 
IMG OID640909727 
Productchemotaxis protein CheV 
Protein accessionYP_001447383 
Protein GI156976477 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG TCGCGAGTAA AGCGAACCAA TCTCAAGGCA TGTTGATGTT TAAGCTCACC 
CTGCAACAGA ACTTCGCAAT TGGCACACTT AAAGTCCGTG AAATTGTTCC TTATATGCCG
ACCACCAAAA TTCCCTATTC GCACCATCAT GTAATTGGCA CTGTGACGAT TCGTGATTTG
ACGGTGCCAG TCATTGATAT GGCGGCAGCA ATTGGGTTCC GTCCTATTCA AGAGGAAGAA
TACAAGAATT GCTATTTGAT CGTGACCGAT TGTCTACGTA CCGTGGTGGC ATTTATGGTG
CGAAGTATCG AGAAAATCAT TGAATGTGAT TGGAAATCTA TCGAAACACC GCCATCAAGT
GCGGGTCATA ATATCTTTGT AACGGGTATT ACTCGCTATG AAGAGAAGAT CGTCCAAATG
CTAGATGTGG AACTTCTACT ATCGAAGATC TACCCGCAAT ACGAGAATAC CAAGATTCCA
ATGCTTACAG ACATCGAGCG TGAGCGTTTG AAAGCCTTGA ATATCCTTTT GGTGGACGAC
TCATCTATCG CTCGGAAGCA ATTGAGCGAC GCGCTAGATC GCATCAACAT CCCATATCAA
ATCTGTAAAA ACGGCTCAGA CGCACTCGAC TTGATGAAGC GAGATGCAGA AGCGAACCGC
CCAATTGACC TTTTAGTGAG TGACATTGAA ATGCCAGGGC TGGATGGTTA TGAACTTGCG
TTTGAAGTTC AAAATGATTC TGCGCTGAAT AACTCTTACC GCATTCTTCA CACGTCTCTA
TCAAGCGAGA TTTGTGTTGA CCGAGCTCAC CAAGTTGGCG CTCACGAGGC ATTAGAGAAA
TTCAACGCTG GGGAATTGAT TGAAGCGATG CTGCGCGGTG CAAAGGAGCT GGAAGCAAAA
GCGATGGCTT CTTAA
 
Protein sequence
MAKVASKANQ SQGMLMFKLT LQQNFAIGTL KVREIVPYMP TTKIPYSHHH VIGTVTIRDL 
TVPVIDMAAA IGFRPIQEEE YKNCYLIVTD CLRTVVAFMV RSIEKIIECD WKSIETPPSS
AGHNIFVTGI TRYEEKIVQM LDVELLLSKI YPQYENTKIP MLTDIERERL KALNILLVDD
SSIARKQLSD ALDRINIPYQ ICKNGSDALD LMKRDAEANR PIDLLVSDIE MPGLDGYELA
FEVQNDSALN NSYRILHTSL SSEICVDRAH QVGAHEALEK FNAGELIEAM LRGAKELEAK
AMAS