Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05198 |
Symbol | |
ID | 5556800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 452870 |
End bp | 454177 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640909675 |
Product | hypothetical protein |
Protein accession | YP_001447331 |
Protein GI | 156976425 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTCAAT CCATCAACCA AAAAATCCAA AACCTACCAA GTGAAAAGAA GCAATTCTTC TCACTTGGCG CTTCTACAGG GATCGTTAAA GCACTTGCAG CCTTCTTCGC TTTTTTGTTG ACGCTTGTAG TCTCAAGGTA TTCTGATGCA GCGACAGCTG GACAATTCTT TTATCTGTTC AACCTTGTCT CCCTTATCGC GGTTATTGCA CAGCTTGGTT TCAATATCTC ACTGGTGAAG TTCAATGCCA TTGCATTTAA AAACCAAGAC AGAACGGAGC AAAGCAATAA CTATCGCACC GCCTTAGTTC GTAGCCTCTT ATTTAGCATT GCAGCCTGTG CTCTAATTTA CCTCGCATTT ATCTCTTTTC CACAACAACT CAATACCACT CAAGTGACCA CCTTCTCGCT TGCCGTGGCT CTTGCGGCTA TTCCTCTCCT TGTTATCGGT CAAACCAACA GTCGAGTACT ACAAGCCAGC AGGAAAGTCA TTTCTTCTCT TGTCGCTCTG CAACTCGGTG TTAGCTTTCT GATGGTGGTC TTGATTGTTG CAGCCAAGCA AACATTGCCG ATAACGACCG ATACTTTGAT GGCACTTCTA TTAATCGCAG CAGCACTTAT TGCGTTATTG TCGACGCTTC AGTGGGTTCG TTCAGGTCAA TATCAGCATG GGAAAACCGC GATAAACCGT GAACTTAACT ATTCAGCGAA ACAAGTCTGG ATTGGAAGTA TCTTCACCAA TTTAGTCCAA TGGGGAAGCT TAGTGATCGC AGGCTTTTTT ATTTCTACCT CTGAGCTTGG GCTTCTTGCT GCTGCACAGC GTACCTCTTT GCTGATCGGT TTTGTCCTCA TAACAATTAA CTTTGTCGTT GCTCCAATGT TCGCTTCTCT CTATAAAGAA GGAAAAATGG ATCGCCTGCG AAACCTCAGC CGCCTTGCCT GCAGAGCCAA CATCGCTGCT GCAATTATCC CCGTGATTAT TTGCGTACTG TTCCCAGAGT TTGTTATGCA GTTATTTGGC AAAGAGTTTA TTGCTGCCGC ACCACTGCTT ATTGCTTTGT CATTAGGGCA ATTGATTAAT GTTGCCACTG GTTCGGTTGG CTTTTTATTG CTTATGAGTG GCCATGAGAA AACAATGAAA TACATCACTA TTGTCTCCGG TGTCATTTCT ATTGCGCTGC TGATAGTGCT CTCTCAGTCA CACGGTGTGC TTGGTGCGGC TTGGGCGATC GCCATTGGCT TAGCTATTCA AAATCTTGCA GCATTGTACT TTGTGAAACG TTACTTAGGC TTCTTTCCTG TGGGGTGA
|
Protein sequence | MLQSINQKIQ NLPSEKKQFF SLGASTGIVK ALAAFFAFLL TLVVSRYSDA ATAGQFFYLF NLVSLIAVIA QLGFNISLVK FNAIAFKNQD RTEQSNNYRT ALVRSLLFSI AACALIYLAF ISFPQQLNTT QVTTFSLAVA LAAIPLLVIG QTNSRVLQAS RKVISSLVAL QLGVSFLMVV LIVAAKQTLP ITTDTLMALL LIAAALIALL STLQWVRSGQ YQHGKTAINR ELNYSAKQVW IGSIFTNLVQ WGSLVIAGFF ISTSELGLLA AAQRTSLLIG FVLITINFVV APMFASLYKE GKMDRLRNLS RLACRANIAA AIIPVIICVL FPEFVMQLFG KEFIAAAPLL IALSLGQLIN VATGSVGFLL LMSGHEKTMK YITIVSGVIS IALLIVLSQS HGVLGAAWAI AIGLAIQNLA ALYFVKRYLG FFPVG
|
| |