Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04947 |
Symbol | |
ID | 5558137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 207424 |
End bp | 207975 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640909426 |
Product | epimerase |
Protein accession | YP_001447082 |
Protein GI | 156976176 |
COG category | [R] General function prediction only |
COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGCTG GCGCGGCGTT GATTGCTCAT CTAAACCAAC GCTCTGTTAA GTTGCACAGT AATTATGGGG ACATCACCAT TGCTAAGCAT GGTACTCAGT ACCAAATGGC TTTGCCTGCA TGGGATGCCA GTCCTGTTCC TGCCAGTTTA GATTTACAGT TATTAAACTT AGAGCAATCT GGTGTGCAAG TGTTAGATGT TGTCACTACC CGAGATCTTG TGGTGGTGTT AGCGTCTGAA CAGCAAGTGA AACAGTACCA GCCGGATTTT GAGCGCCTCT GCCAAATCCG AGACTTTCAT GCTGTGATGG TCACCGCTCA AAGTGGGCCT AACGATTATG TTTTGCGTTA CTTTGCGCCC AAAATCGGCA TCAATGAGGA TATCGCAACA GGGTCAGCAC AGTGCTCACT CGCTCCCTAT TGGTTTAAGA AGTTGGATGT AGATAACCTC AATGCGAGTC AACTTTCCTC AAAAGGCGGC TTTTTCCAAG TCGCGAAACT CAGCTCTGAC ACGTTAGTGA TATCTGCATC AGCGCGATTA AGAGAGCAGT AA
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Protein sequence | MGAGAALIAH LNQRSVKLHS NYGDITIAKH GTQYQMALPA WDASPVPASL DLQLLNLEQS GVQVLDVVTT RDLVVVLASE QQVKQYQPDF ERLCQIRDFH AVMVTAQSGP NDYVLRYFAP KIGINEDIAT GSAQCSLAPY WFKKLDVDNL NASQLSSKGG FFQVAKLSSD TLVISASARL REQ
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