Gene VIBHAR_04829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04829 
Symbol 
ID5556614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp95990 
End bp97186 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content48% 
IMG OID640909308 
Producthypothetical protein 
Protein accessionYP_001446965 
Protein GI156976059 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATTG CTATTGCAGC AACTGGCCTT TCACTCATCC TAATATTTGT TTGGATGATC 
TCGTTGTCGA TGCGAAAGCA ACGTCTCGAG GCAGAGAGGA AAGCGCGCGA GGCGGCGTAT
CGCAAGGCGA TGCAAAAAGC GCGAGAGCAA GAACGTAAAG AACGTGCGTT TAAGGCGGAA
ACGGGTCATG TGCCGACCAT TCTTTATTTA GCAAAAGAAG CGGAACGAGA AAACATCAAG
CAAGCTCTGT ATTGGTACGA CAAAGCCGCC AAACTGGATA ACGTTACCGG CATGTACGGT
GTCGTTCGTT TGGCAGAGCG CATGCGTGAA GACGTGATCT TAAGAGAGCA AGCTAACTTT
TGGCGCACGG CGATTGCGGG CTTAGAAGGG GATGTTGAGG CTAAGTTTGC CACTGGTAAA
GCGCTCGTAT TTGGGCGTGG TACAGAGAAA AACATTCCCA AAGGTTACCA ATTAATCGAA
GAAGCTGCTG ATGAAGGCTG TATTCCAGCC ATGCTGTATA TGGGTGAGTG GCAGTTGTCA
CCAGAAAATA CATCAGGTCA GCGAGCAGAC GCCTTATTTT GGTTTATGAA AGCCGCAGAA
CAAGACAGTG CGGATGGCAA AATCCAAGTT GGCCTTTGTT ACCTCAATGG CATTGGTACT
GAAAAGAGCA TGGTAAAAGG CTGCTACTGG TTAGAACGAG CAGCAGAGTG TGGTAGTGCG
GAGGCCATGT ATCATGCAGG TGAAGCTTGG AAAGACACAG GCAAAACAGG TAACGCGATT
GCTTACGTTT GGTTGTTCTT GTCTGCGAAC ATGGGTTATG AGCCTGCGAG AGTTGTACGT
GATGAGGTTG CCAGCAACAT CGGTGTGGAT GTGGTGGTTG GCTTACAATC AATTGCTAAG
CCGCTACAAA GAAAGTTAGC GTCTGGTGTT GTGAAGAAGC ATTCCATCAT TCGTGCATTG
AACAAGGTCT ATAAGCGTGA GCCGTACTTC CCTGGTGAAG AGGAGCTAAA CGAGCTGCTC
AGTGAGGAAC AGCATGATGA AGCAAGCCTC CTCGGTGACA CACCAGAGTT GAACTTTGAA
ACCGAGATGC CTGTTCAACA AGAGTTTGCA CCTCCACCAA AACAACCTTC CAAAGAAGTG
CTCGATTTTA CGCAAAACTT TTTACAGCCA CAGAATCTCA ACAAGCCTCA TTCGTGA
 
Protein sequence
MGIAIAATGL SLILIFVWMI SLSMRKQRLE AERKAREAAY RKAMQKAREQ ERKERAFKAE 
TGHVPTILYL AKEAERENIK QALYWYDKAA KLDNVTGMYG VVRLAERMRE DVILREQANF
WRTAIAGLEG DVEAKFATGK ALVFGRGTEK NIPKGYQLIE EAADEGCIPA MLYMGEWQLS
PENTSGQRAD ALFWFMKAAE QDSADGKIQV GLCYLNGIGT EKSMVKGCYW LERAAECGSA
EAMYHAGEAW KDTGKTGNAI AYVWLFLSAN MGYEPARVVR DEVASNIGVD VVVGLQSIAK
PLQRKLASGV VKKHSIIRAL NKVYKREPYF PGEEELNELL SEEQHDEASL LGDTPELNFE
TEMPVQQEFA PPPKQPSKEV LDFTQNFLQP QNLNKPHS