| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04771 |
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| Symbol | |
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| ID | 5557111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 37043 |
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| End bp | 39553 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640909250 |
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| Product | peptide ABC transporter permease |
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| Protein accession | YP_001446907 |
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| Protein GI | 156976001 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAG CTAAGCTCCC AAACACCAGA TTCACACATA CTCGACTAGC AATTAGGCTA
TTTGCAGCAC ATTACCGACA AGCGCCGCTG CAAGCCGCCG CGATTCTGAT CGGTATCGTG
TTGGCTGTGA CCTTATTTGT TGCGGTGCAA GCCATCAACC TCAATGCCAA GCGAAGTTAT
GCTGAGTCTA CCGAGCAGCT TAGCGCACAA GCTCAGAACC TAATTATTCC ACCAGCAGGG
CAAAACTATC TGCCCGAATC GCTTTACTTC ACCCTGAGGC AAAACGGGCT CAGTGCAGCG
CTACCTGTAA TCGAAGGGCG AGTGAGAGAT GAACAAGGGC GACGTTGGTC AGTGCAAGGC
AGTGAGTTGA TTGCCGCCAT CTCTTCACGT TCGCGCTACT TATCAGATAA TGAGCAGAAC
GTGTCTTTGT TCAATAGTGC TTTTCCTTTG CCTGAGCTTT TAGCTGGCGA GCCAATCGTG
ATGATGAGCC AATCTCAACA TCAAAATCTA GGAGAGGTGC AAAACCTAAC TCTGGACGAC
ATTCCAACCC AAGTGGTGGT GCTACCTGAC GAATGGCAGT TAGGTAGCCG AATGTTGATG
GACATTGGCT TTGCCCAGCA ACTGCTCAAT AAACAAAGAC AACTCAGTTA CATTGCGGTT
TTCCATTCGG GCGATAAAGG TAATAAAGAC ACGCAAGCAA AATGGTCAAG CCTCATTGGT
GAGCAAGGAC AATGGATTTC CAATAATCAA AGTACAGACC TTGGCTCGCT GACCGACAGC
TTTCACCTCA ATCTCACCGC TATGAGCTTA CTTGCCTTTT TAGTCGGGCT GTTCATCGCT
TACAATGGCG TAAAGTACAG TTTGCTGAAG CGCAATCGAC TGTTAGTGCA AATTCAACAG
GCGGGCGTTG CGCCGAGTAT TGTGTTCTCT GCGCTGTTAG TTGAACTCAC TCTTCTCGTT
GCCATCGGCG CTTCCATCGG TTTTGTATTG GGCATGCAAG TTAGCCATTG GCTACACCCG
ACCGTAGCAC TGACTTTAGA GCAACTTTAT GGTGCGACAC TGCTGCCCGG CACTTGGCAG
TGGCAATGGT GGGCGCAAGC GCTCTTACTC ACGTTAGCCG CCACCCTATT GGCATGTTGG
CAGCATTTTA AACAGCGCGT GCGTCAGCCG CTTTCCTCTC ATGGCGGATT TTATCAAGCA
CCTGAAGCCT CTAACGAAAA CCAATTGTTC GTGATAGGTG CTGCATTGAC TGCTCTCGCG
CTCGCAGGGT TATGGCTGAG TGAGCACCAC CGATTTACCA TGGCGTGGCT CGGCATACTT
GTGGTGTCGA TTCCTTTGTA CTTACCCAAA ACACTCAGCG TGTTAGCCAA TTGGTGTGAG
AAGCGCACCA CTTCCGGTTT GCTGCAGTAT CTGTTTGCTG AGTTGCGCGA GCTGATTTCT
CCGCTTTCTC TCGCCATGAT GGCACTGCTA CTCGCCGTTA CTGCCAATAT GGGGATGAAC
ACCTTAGTGG GCAGCTTTGA ATCCACCCTA AAACAGTGGT TAGAACAAAG GCTACACGCC
GATATTTACG TCAGCCCTGC ACAAGGAGAA ATCGCAGATG TAGAGCGCGC GTTAGGGCAG
TTCGACAAGG TTGAGACCGT CTACAAGCAA TACTACGTCG ACGATAATCT GCAAGGCTTA
CCAATTTTGC TCGGTACCAA AGACAAAGGC AGCTTAGAGC AAACCATGGT GTTCAAATCG
CATTTGGAGA ACTTCTGGTC CCGCTTTTAC CAAGGTGAGC TGGTTGCCAT CAGTGAACCA
ACCGCGGTCA AACTGGGTTT ATCACTGGGT AGCGAGCTCA CGCTTGATGC CGTTCCAAAT
AAGAACCTGC TTGTGGGTGC GGTATTCCAT GATTACGGCT CACCCAACGG TGAAGTGTTA
TTGGCACCCA AATTATGGCA AGAGAGCGGA TTTACCGACT TGCCGACAAG CCTTGGTATT
AAAGTCTCGG GAGACCCACA AATCGTCTAC AAGCAACTGC GCGAGCAATT GAATCTGCAT
CCAAGTCAGC TCTACGATCA GGCGCAAATC AAATCCATCG CGTTGGATAT ATTCTCGCAA
ACCTTCGCCA TTACGCGCGC GCTCAACGGC GTTACGTTGA TGGTCGCGGT GATTGGTTTG
TTCAGTGCTT GCTTCATGTT GCTGGACGCG CGCAAAGCTG CCATTGCAAG GCTGTACGCT
CTGGGCGTCA GCCGTCGAAA ATTAATGACC ATGGTGGTCG GACAGATCGT CGCTTTGGTC
AGTTTTACTC TGGTTATCGC CCTGCCCCTC GGTGCCATGG TGGGATATGT ACTGACAGAC
ATCGTCACCT TGCGCGCTTT TGGTTGGAGC CTAAATTATC TGTGGAATTG GAGTGACGCC
CTCAGCATTG CGGCGATCAC TATCTTGGTG GCAGTGATCG CAACCTTGAT TCCGCTGTGG
CGATTGGTCA GAAATCCTGT CGTGTCCAGT TTGCAAAGCG AGGTGTTGTG A
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| Protein sequence | MKQAKLPNTR FTHTRLAIRL FAAHYRQAPL QAAAILIGIV LAVTLFVAVQ AINLNAKRSY
AESTEQLSAQ AQNLIIPPAG QNYLPESLYF TLRQNGLSAA LPVIEGRVRD EQGRRWSVQG
SELIAAISSR SRYLSDNEQN VSLFNSAFPL PELLAGEPIV MMSQSQHQNL GEVQNLTLDD
IPTQVVVLPD EWQLGSRMLM DIGFAQQLLN KQRQLSYIAV FHSGDKGNKD TQAKWSSLIG
EQGQWISNNQ STDLGSLTDS FHLNLTAMSL LAFLVGLFIA YNGVKYSLLK RNRLLVQIQQ
AGVAPSIVFS ALLVELTLLV AIGASIGFVL GMQVSHWLHP TVALTLEQLY GATLLPGTWQ
WQWWAQALLL TLAATLLACW QHFKQRVRQP LSSHGGFYQA PEASNENQLF VIGAALTALA
LAGLWLSEHH RFTMAWLGIL VVSIPLYLPK TLSVLANWCE KRTTSGLLQY LFAELRELIS
PLSLAMMALL LAVTANMGMN TLVGSFESTL KQWLEQRLHA DIYVSPAQGE IADVERALGQ
FDKVETVYKQ YYVDDNLQGL PILLGTKDKG SLEQTMVFKS HLENFWSRFY QGELVAISEP
TAVKLGLSLG SELTLDAVPN KNLLVGAVFH DYGSPNGEVL LAPKLWQESG FTDLPTSLGI
KVSGDPQIVY KQLREQLNLH PSQLYDQAQI KSIALDIFSQ TFAITRALNG VTLMVAVIGL
FSACFMLLDA RKAAIARLYA LGVSRRKLMT MVVGQIVALV SFTLVIALPL GAMVGYVLTD
IVTLRAFGWS LNYLWNWSDA LSIAAITILV AVIATLIPLW RLVRNPVVSS LQSEVL
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