| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03702 |
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| Symbol | |
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| ID | 5554708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3738504 |
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| End bp | 3740534 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640909181 |
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| Product | regulatory protein CsrD |
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| Protein accession | YP_001446843 |
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| Protein GI | 156975936 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTATA CCCCAACTCT TAAGCTAAGC ACGCGGCTGG TGGCCTTTGT CACTATGATC
GTTATATGCG CAATGTTTAT CTTGTTTGTC GGTGGCACCC TCTCTTTCAA ACGACTAGGA
CAAGAGTATC TCAACCATTA TTTGGAAGGG ATCGTTGAAG TAGTTGATAA AGAGATGGAA
GACCCAGACG CAGCCTATTC GATGCAGCGC TGGATGCCGA AGATGCTGCA GGCGAGTAAC
ATTGTCGAAA TGACGTTGTC GACGAATAAC GCCGTTGTTT ACCGTTTCAA AGATACTTCT
CATAAGATGG ATAGCTCGGT GTTGTTTGAG CATGAGTACC AACTCACTCA CAACCAAGAC
TACGTCATCT ATTTTAAAGC GATCCCTCCT TATTTAGGCT ACGGCTACTC GATGCAGGCA
TTGTGGTCAA TCACGCTTGC CGTCGTTCTG ATCATTTTCT GTTTGATGCG CGGTGTTAAG
TGGCTCAAAG AACAGCTTGC AGGATCGGAA ATGCTCGAAG AGCGTGGACG AATGATTTTA
GCGGGCCGAG TCGAGCAATA CGCAAAAGGT GATGAGCGAG AATGGCCTTA TACGGCCAGT
GAGGCATTAG ATGTATTGAT CGAAGAACTT CAAGATGCTC GCCAAGAACG CAGTCGCTTC
GATACCTTTA TCCGTACGCA AACTTTCCTC GATAAATTGA CTGGCACGGC CAACCGAGTG
TTGTTTGACA GCAAGCTTGA ATCTGCTTTG TTGGAAAGTG GTGCACGTGG CTCAGTGATG
CTGATCCGCA TTCAAGATTG GAAATCCGTT GAAGAAGAGC AAGATAAGCA AACTTGCGAC
GAGTTTATTG TCGAAGTGGG TAGTTTGCTT TCAAACTTAG TTCAGCGTTA TCCCGATGTC
GTGTTCTCAC GCTACTACAA TGCAGACTTT GCATTATTTT TGCCTCATCA ATCGGGCAAG
GACGTGGCGA ATTTAGCTTC TCAATGTATT CGCCAGCTAG AAAAACTCCA CCCTCCTTAT
CCGTTGGATG CTGACAATTG GTGCCATATC GGTATCACTA TGTACAAAGA GGGTGAACGT
CATAGTCAAA TCATTGATGA AGCAGAGACG GCATTACGCA GTGCCCAGTT GCAAAATAAC
AACAACTGGA GCCGCTTTAA GAAGTGGAAT CACGACGAGG AAGCACGAGG CAGTGTGAGA
TGGCGTACGC TATTTGATTC AGCACTCACA GCTGAAAATG TGATACTCTA CGCACAATCC
GCCTATCTAA TAAGTGATGT GGCGCATAAA AAACCTTTGC ACGAAGAGTT AACATGTCGG
ATTCGTGATC CGGAAAATGG CATTGTTAAA GCTTCTCGCT TTATTTCTGC CGTTCGACAA
GTCGGTTATG AAGCGCAGAT GGACCGCGCA GTGGTTAATA AATTCTTAAA AGACTTTAAA
CATAGCTTTG ATAGCTCTAA ATGCTATGTA CTTAACTTAC ATGTTGTGCC TTTTGGGCAA
CGAGAATATT TCAAATGGTT CCGTGATGAA CTCTTACAGT TGTCACGAGA GCAAAGAAAG
TGTCTCACTT TTGAGTTTGT CGAAGCACAA TTTGTAAGAC ACTTAGACTT TATGCGACCA
GTCGCTAAAA TGCTGGCCGG TTTAGAGTGT CACGTCATGA TTGGGCAAGC TGGACGCACG
ATCGTCAGTA CCCATTATCT AAAAGAAGTG GACATTCGTT ACCTTAAGCT CCATCGCAGT
TTGGTAACTA AAATCGATCA GAGACATGAG AACCAGTTGT TTGTCCGCAG TATGTTGGGT
GCGGCCGCAA ACAGCAAAAC AAAAATAATA GCAGTGGGAA TTGAGAATAA GCACGAATTG
AACACCCTGA ACGAATTAGG GGTTCATGGC GGGCAGGGAC GTTATTTCTC TCCAGAAGAG
CAGTATCTAC CTAGATCCAA GCCAACCATT ATTTCTCAAG CGGACTCTCA AGTGAAATTG
GGACGACGAA ATCGCTGGCG AAAAAATAAA GATAATAATC ATGGATTTTA A
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| Protein sequence | MRYTPTLKLS TRLVAFVTMI VICAMFILFV GGTLSFKRLG QEYLNHYLEG IVEVVDKEME
DPDAAYSMQR WMPKMLQASN IVEMTLSTNN AVVYRFKDTS HKMDSSVLFE HEYQLTHNQD
YVIYFKAIPP YLGYGYSMQA LWSITLAVVL IIFCLMRGVK WLKEQLAGSE MLEERGRMIL
AGRVEQYAKG DEREWPYTAS EALDVLIEEL QDARQERSRF DTFIRTQTFL DKLTGTANRV
LFDSKLESAL LESGARGSVM LIRIQDWKSV EEEQDKQTCD EFIVEVGSLL SNLVQRYPDV
VFSRYYNADF ALFLPHQSGK DVANLASQCI RQLEKLHPPY PLDADNWCHI GITMYKEGER
HSQIIDEAET ALRSAQLQNN NNWSRFKKWN HDEEARGSVR WRTLFDSALT AENVILYAQS
AYLISDVAHK KPLHEELTCR IRDPENGIVK ASRFISAVRQ VGYEAQMDRA VVNKFLKDFK
HSFDSSKCYV LNLHVVPFGQ REYFKWFRDE LLQLSREQRK CLTFEFVEAQ FVRHLDFMRP
VAKMLAGLEC HVMIGQAGRT IVSTHYLKEV DIRYLKLHRS LVTKIDQRHE NQLFVRSMLG
AAANSKTKII AVGIENKHEL NTLNELGVHG GQGRYFSPEE QYLPRSKPTI ISQADSQVKL
GRRNRWRKNK DNNHGF
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