Gene VIBHAR_03114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03114 
Symbol 
ID5553571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3140194 
End bp3141348 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content49% 
IMG OID640908595 
Productchorismate synthase 
Protein accessionYP_001446290 
Protein GI156975383 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCAC GAAGAATTGA AAAGCAGTTG CGTTCATGGA GAGCGTGGCG ACAAGAACTT 
GAGGAAGTAA TGGCAGGAAA CAGTATCGGA CAACATTTCC GAGTAACGAC ATTCGGAGAA 
AGTCACGGTA TCGCACTAGG ATGTATCGTA GACGGATGCC CTCCAGGTTT GGAAATCACT 
GAGGCAGATC TGCAAACGGA TCTCGACCGT CGCCGTCCTG GCACATCACG TTACACTACC 
CAACGTCGTG AACCGGACGA AGTAAAAATT CTTTCTGGCG TATTTGAAGG TCAAACTACG 
GGCACTTCAA TTGGTCTGAT GATTGAGAAC ACAGACCAGC GTTCTAAAGA TTACTCAGAC 
ATCAAAGACA AGTTCCGTCC AGGACACGCT GATTACACCT ACCACCAGAA ATACGGTGTG 
CGCGATTATC GAGGTGGCGG CCGTTCGTCT GCTCGTGAAA CGGCAATGCG TGTGGCGGCT 
GGTGCAATCG CTAAGAAATA CCTGAAAGAC GAGTTCGGTG TTGAAATCCG CGCTTACTTG 
TCACAAATGG GTGACGTTTC AATCGATAAA GTGGATTGGA ATGAAATCGA AAACAACGCG 
TTCTTCTGCC CAGATGCAGA CAAAGTGGAA GCGTTTGATC AACTTATCCG TGACCTGAAA 
AAAGAAGGCG ACTCTATTGG CGCTAAAATT CAGGTTGTGG CAACGAATGT ACCTGTTGGT 
CTTGGTGAGC CTGTATTTGA TCGTTTGGAT GCAGACATCG CGCACGCGCT AATGAGCATC 
AATGCGGTGA AAGGCGTTGA AATCGGCGAC GGTTTTGATG TGGTAAACCA AAAAGGCAGC 
GATCACCGTG ATACGCTTTC TCCAGAAGGC TTCGGTAGCA ACCACGCAGG CGGCATTCTT 
GGCGGTATCT CTACCGGTCA AGAGATTGTT GCAAACATTG CGCTTAAGCC AACGTCAAGC 
ATTACGGTTC CGGGTGAAAC CATCACTAAA GAAGGTGAGC CAACTCAGTT GATCACTAAA 
GGTCGTCACG ACCCATGTGT AGGTATCCGC GCCGTGCCTA TTGCAGAAGC GATGCTGGCC 
ATTGTCGTGA TGGATCACTT GCTACGTCAC CGTGGTCAAA ACCATGGTGT AAAAACCGAG 
ACTCCAAAGA TTTAA
 
Protein sequence
MIPRRIEKQL RSWRAWRQEL EEVMAGNSIG QHFRVTTFGE SHGIALGCIV DGCPPGLEIT 
EADLQTDLDR RRPGTSRYTT QRREPDEVKI LSGVFEGQTT GTSIGLMIEN TDQRSKDYSD 
IKDKFRPGHA DYTYHQKYGV RDYRGGGRSS ARETAMRVAA GAIAKKYLKD EFGVEIRAYL 
SQMGDVSIDK VDWNEIENNA FFCPDADKVE AFDQLIRDLK KEGDSIGAKI QVVATNVPVG 
LGEPVFDRLD ADIAHALMSI NAVKGVEIGD GFDVVNQKGS DHRDTLSPEG FGSNHAGGIL 
GGISTGQEIV ANIALKPTSS ITVPGETITK EGEPTQLITK GRHDPCVGIR AVPIAEAMLA 
IVVMDHLLRH RGQNHGVKTE TPKI