Gene VIBHAR_02479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02479 
Symbol 
ID5553533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2496920 
End bp2497441 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content42% 
IMG OID640907965 
Product3'-5' RNA ligase 
Protein accessionYP_001445668 
Protein GI156974761 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTAT TTTTCGCGCT TACCTTTGAT AAAACAAGCA AGTCAAAGCT CAAGCAAATT 
CAAGAAAAGT TAAAACAGCA TGAGATAGTA GGGCGATACA CTCGCAAAGA AAACTTCCAT 
ATTACTTTGG CTTTTATTGG TGAATCGACA CAGGAGGAGT CTCAGCAACT AACGAAGATT 
CTTCATAACC TGAAGTCTTC TTGCAAACGG ATTACTGTGG ATCATCTAGG TTCGTTTCAG 
CAAAGTGGCA GACAACTAGC GTGGTTGGGT ATTGAAGACA ATCGTGCTGT TACCAATCTG 
CAAAATGAAC TGATAGAAGT ATTGGAACAG GATGGCTTCG CGACGGAGTC ACGACACTAC 
GTTCCGCACA TTACATTAGC TCGTCATATC GATAAGCAAG CGCCATTAGA TGATGTAAAG 
ATCTCACCAC TGCCGTTACC GATTGACGCT ATCGCACTAA TGGAAAGTAA AACGGTAGAG 
GGTAAATTGA TTTATCGAGC AATTGCAGAG GTTGCTTGTT AG
 
Protein sequence
MRLFFALTFD KTSKSKLKQI QEKLKQHEIV GRYTRKENFH ITLAFIGEST QEESQQLTKI 
LHNLKSSCKR ITVDHLGSFQ QSGRQLAWLG IEDNRAVTNL QNELIEVLEQ DGFATESRHY 
VPHITLARHI DKQAPLDDVK ISPLPLPIDA IALMESKTVE GKLIYRAIAE VAC