Gene VIBHAR_02280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02280 
Symbol 
ID5552804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp2279358 
End bp2280410 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content48% 
IMG OID640907766 
Productformate dehydrogenase, cytochrome b556 subunit 
Protein accessionYP_001445469 
Protein GI156974562 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATA CTCTTAAACG TGCGTCTCTT GTAATGCTGT CAATGATGAC AGCATTACTG 
CTGACCTTTT CGATGCCAGC GTCTGCGCAA GAAGGCACAT CTCCAGTGGT ACAACAGGAG 
ATGACGCAAC TTGCAGGTGC AGACTTCTGG CGTCAGGTCA AAGAGGGGCA AGAAGGCTAT 
ACCACGTCGA AATCAGCGGA ACACGGTGTG CTGATCAGTA CTCCGGGTGA GACTTGGTAC 
ATTCTTAAAG AGAAATGGAT GTCTCCTGCG GGCGCTGTCG CGATTTTCGG CAGTATCGCA 
ATGGTTATCA TGGCTTACGT ATTCGTTGGT CCTCTGATGC TAAGCAAGCC ACGTACTGGC 
AAGAAGATGA AACGCTGGTC TCGACTAGAC CGCGCACTAC ACTGGAGCAT GGCGTTTACC 
TTCTTAACGC TAGCATTCAG TGGTTTGATG CTGGTTTACG GTAAGCACTT CTTGAAACCG 
TACGTACCCA CTGAGTTCTG GGGCTTCATC GTTATGTTGG CGAAGCAGTA CCACAACTAC 
ATGGGTCCGC TGTTCTTCAT CTTGCTGATG TTTGTTCTAC TGAAATGGTG GCGCAAATCT 
ATCCCTAACA TGACAGACAT CCGTTGGTTC ATGAAAATGG GAGGCATGGT TGGTAAACAT 
AAAGGTACGC ACCCATCGGC TGGTTTCTCC AACGGAGGTG AAAAGGCGAT CTACTGGTTG 
TTGATCTTCT TCGGTGCTAT CGCTGCAGTG AGTGGCTTAA TTCTGGATTT CCCAATTTTC 
GGCCAAACTC GTCGCGATAT GGAATTGTCT AACCTTGTTC ACGCGATTTC GGCACTGATT 
CTAATCTGTG GCTTTATCTT CCACATCTAC ATCGGCCTAT TCGGTATGGA AGGTGCGTTA 
GAAGGTATGG TTACCGGTGA AGTTGACGAA ACATGGGCGA AAGAACACCA CGATCTTTGG 
TATGAAGAAG TGAAATCCAA AGAAGCGATG GGCGAAACAG ATACGGCAAA CACGGAACCA 
AAAGGAGCGA AAGCGAATGA ACAAACCTCA TAA
 
Protein sequence
MLNTLKRASL VMLSMMTALL LTFSMPASAQ EGTSPVVQQE MTQLAGADFW RQVKEGQEGY 
TTSKSAEHGV LISTPGETWY ILKEKWMSPA GAVAIFGSIA MVIMAYVFVG PLMLSKPRTG 
KKMKRWSRLD RALHWSMAFT FLTLAFSGLM LVYGKHFLKP YVPTEFWGFI VMLAKQYHNY 
MGPLFFILLM FVLLKWWRKS IPNMTDIRWF MKMGGMVGKH KGTHPSAGFS NGGEKAIYWL 
LIFFGAIAAV SGLILDFPIF GQTRRDMELS NLVHAISALI LICGFIFHIY IGLFGMEGAL 
EGMVTGEVDE TWAKEHHDLW YEEVKSKEAM GETDTANTEP KGAKANEQTS