| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02194 |
|---|
| Symbol | |
|---|
| ID | 5555466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 2191219 |
|---|
| End bp | 2194176 |
|---|
| Gene Length | 2958 bp |
|---|
| Protein Length | 985 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640907681 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001445384 |
|---|
| Protein GI | 156974477 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3979] Uncharacterized protein contain chitin-binding domain type 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA ATAAAGTCAG TATGGGACTT AATATAGTTG GTGGAATATT GCTTTCAGGA
ATAGCAAACG CTCAAGTCAT TCAATTTAAT AATGAAACGC CAGTAAATAA TTTACAGGGT
GATTTTGAGG CGATGGTGAT TTATGCGCAA AACATTACTG TCCCTCATTA CAATGATAAA
GGCGACCCTA GGCCGCATCT CACCGCATTG CGTGATACTT TACTTCTTGT TAAGCCAGTT
GAACCTTTAA ATGTCTCATC ACAAGTCAAA GTTATTGCAC GAGATAGTCA AGGCAATCAG
TTGGGTGCTT TATCACTAAA CACACCAGAG CAACTTCCCA ATCATGACGG CCCCAACCTC
GACATTATGT ACGCGAAAGA CATGTGGTCT GTAACGCTCC CAGCGACTTG GATACAACCC
GGTCTGACTT TGGAGTTGCT CAATGGGAGT ACATCTGGTC TTCTGTCCGA TTTGGATATT
GGCGCGCCTA ACGAACTGCT CATTAATACG ATGGATTTGG GGATGCTGAC TAATCCAAGG
GGACGTTTCT ACTTCGCTGA TAATCCAGAG TTGCACAAGG ATTACTTCCA GAAAATTCCG
GTAAGTAAGT TGATTGTTAA CCCTTACGAA ACCGTGAAAC TTGATGAAGT GATGCTACCG
GATGGAGATT TACTTACAGA GCTTGACCCG AGCACTGGGA CTTGGCACCA AGGAGATATG
CGAGCGGATA CCACGAAGAT CTTGATGTCC CATGGTATTA ATCTCGCAAA CTATGGGATC
AATTCATCAA CGTCAGTGTC AGAGAGAGCA CACCCGTACA CGGCGAACCA AATTACCGCG
ATTGCAGCAG TAGGTCGTTA TCAAAATGGT GTTGTTGCTC ACGGTGGTAG TGGAGGCAAC
GGCATGGTGA CTATCGACTC ATCAGTGGGA AATGAATGGA GTCACGAAGT TGGCCATAAC
TTTGGGTTGG GTCATTGGCC AGGAGGCACT GATGGGACGA CACACCGCCC ATCAACGGAC
ATCAACTCTG CTTGGGGCTG GGATCTATTT CAGAAGCGTT TCATTGCCAA CTTCATGTGG
AACAAGCGTA ATGGCGAAGA CCAAGTTTGC TGTAGCGATG GGATTGGCAT TCCTGCATTT
GAAGGCTACA AGTTTAATCG AGATGCGATG GGGGGTGGTG AGCCAACTTC ACCAATTTCC
AAATACACGC TGCATACTCC TTATGTGCTA GAGAAAATTC AGACTTTTAT GGAGGGCAAA
GCTACATTTG ATGAATCATC TCCTACTGGG TTTACTAAGT GGAATGATGA AACGAAAGCG
ATGCAAGCGT TCCAGCAACC CGCTATTTTG TTATCGAAAT CGATTACCTC TCAATCACAA
TTGAATACGA TCAAAGACGA CATCGATGGC TCCGTATTGT TGGGCTACAT CAACGATTTT
GACATCACGA AAGTCGAGAC GGGAGATGGA CGTTGGATAC GCGATATTTA TTTGCCTAGT
GCAGAAAATG TTGCAGTAGG CAAAGCTGTG AACATTGCGC GTTACTCTGG CTATGGAGTG
ACGGCTCATG TTAATGGTCA GTTGGTTAAC TTGAATCGAG GTGATAGTAA GTTTTACATC
AGTGATGGAA AAGCATGGCT AGAAACCACT GAAGATCAGG TAGCCGAGGG TAAACCAACA
CGTATTCCAA CTGACTATGG TGTACCAGTA ACGACGCTAG TAGGTTATTA CGATCCTCAG
CAACAATTAG ACAGCTACAT TTTCCCTGCT TTGCACGGCG CTTATGGGTT TGTTTATCAA
CCTACTCCTG TTGATCGCCT CGATACGACA GGTTGTTATG TCAAAGTGTA TAACGGTCAA
GACCACCAAA CGGACAATTA TCAGTTGGTT GGATTCCGTT TCGACGATAA TGTGATGAAC
AAATTCCATA TCAACCTTAA GCAGACCGAT GATCCAACAA GGGCAGAGGT TGTGTGTGAT
AACGCTGTTT TAAGCTCGTT AGATATAGAG AAGCCAAAGC AAGCGTTAGA GGTTTCTATC
GTCCAGTCAG ATTCTTTAAA ACCATCCGAG AACAATAAGC CCGTAGCGCA CGCAGGTGAA
GACCAGTCAG TATTGTCAGG AGCAACTATC ACCTTATCGG CCGACAAATC TACTGATGCC
GATGGTGACA AGTTAACCTA TGTTTGGGAG CAGATATCGG GTTTGCCCGC GAGCATTCAA
GCAAGCAACG CAATGACAAC CAATGTGGTC TTGGCAGAAT CGACACAAGA GCAATCTTAT
GTGTTTTCTG TGTTGGTTTC AGACGGTAAA TCGAGCTCCA GTGATATGGT CACCATTATT
GCTCAGCCCC AACCAACTCA AAACCATGCA CCGGAAGTCT CTCTTCCAAG CAGTATTGAT
GCAAAACCCG GAGAGGTTAT AGAGATAACC GCGACGGCAT CGGATCCTGA TGGTGATGTG
CTGTCATTTA AGTGGAGCAC TTCAGGTTTA GCTTATCAGA CTATGTCCGG TGGCACGATT
CAACTTTCAG TTCCAGACGT GACGGTTGAT AGTCAATTTT TGCTAAGTGT TGTTGTTTCC
GATCCTAAAG GGGAGAGTGC AAGCGCAAAT ACAACGCTTA ACGTGAAAGC CAGCGGCAAT
ACCTGCAGCG TCAGTGACCC AAATGCCACG AATTACGACG CGTGGTCTGC GAGCAAATCC
TATTCAGGTG GTGACTTAGT CAGTTATAAG CAGTTGGTTT GGAAGGCAAA GCACTGGAGT
CAAAATAATC AACCTGACAG TAGTGATGCT TGGGAGCTCC TAAGTGATGT TGTGCTGCCA
TGGTCAAGTC AAGCAGCATA CTCCGGAGGT GCTCAGGTTA CCTATAACGG GGTTAAATTT
GAGGCCAAGT GGTGGACTCG TGGCGAGCAG CCTAATGTGT CCAGTGTCTG GATCAACAAG
GGCGCTGCCT GCCAGTAG
|
|---|
| Protein sequence | MKRNKVSMGL NIVGGILLSG IANAQVIQFN NETPVNNLQG DFEAMVIYAQ NITVPHYNDK
GDPRPHLTAL RDTLLLVKPV EPLNVSSQVK VIARDSQGNQ LGALSLNTPE QLPNHDGPNL
DIMYAKDMWS VTLPATWIQP GLTLELLNGS TSGLLSDLDI GAPNELLINT MDLGMLTNPR
GRFYFADNPE LHKDYFQKIP VSKLIVNPYE TVKLDEVMLP DGDLLTELDP STGTWHQGDM
RADTTKILMS HGINLANYGI NSSTSVSERA HPYTANQITA IAAVGRYQNG VVAHGGSGGN
GMVTIDSSVG NEWSHEVGHN FGLGHWPGGT DGTTHRPSTD INSAWGWDLF QKRFIANFMW
NKRNGEDQVC CSDGIGIPAF EGYKFNRDAM GGGEPTSPIS KYTLHTPYVL EKIQTFMEGK
ATFDESSPTG FTKWNDETKA MQAFQQPAIL LSKSITSQSQ LNTIKDDIDG SVLLGYINDF
DITKVETGDG RWIRDIYLPS AENVAVGKAV NIARYSGYGV TAHVNGQLVN LNRGDSKFYI
SDGKAWLETT EDQVAEGKPT RIPTDYGVPV TTLVGYYDPQ QQLDSYIFPA LHGAYGFVYQ
PTPVDRLDTT GCYVKVYNGQ DHQTDNYQLV GFRFDDNVMN KFHINLKQTD DPTRAEVVCD
NAVLSSLDIE KPKQALEVSI VQSDSLKPSE NNKPVAHAGE DQSVLSGATI TLSADKSTDA
DGDKLTYVWE QISGLPASIQ ASNAMTTNVV LAESTQEQSY VFSVLVSDGK SSSSDMVTII
AQPQPTQNHA PEVSLPSSID AKPGEVIEIT ATASDPDGDV LSFKWSTSGL AYQTMSGGTI
QLSVPDVTVD SQFLLSVVVS DPKGESASAN TTLNVKASGN TCSVSDPNAT NYDAWSASKS
YSGGDLVSYK QLVWKAKHWS QNNQPDSSDA WELLSDVVLP WSSQAAYSGG AQVTYNGVKF
EAKWWTRGEQ PNVSSVWINK GAACQ
|
|---|
| |