Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02163 |
Symbol | |
ID | 5556092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 2161896 |
End bp | 2162810 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640907650 |
Product | phytoene synthase |
Protein accession | YP_001445355 |
Protein GI | 156974448 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA CGGCTCTTAA GTGTTTGTCG AATCATGGTA AAACGTGGAG ATTTGCCAGT TTTTTGCTCA GTAAACAACA GGTGGAGCAA GCCGCTAGGC TGTACTACTT TTGCCGTTGT ATTGATGATA TTGCCGACAG TACAGCTAAT AAACAGCTAG CTTTCGAAAG TTTGGAGGAA GTACAGCGAC AGCTGTCGTT GGGAAAGTCT GATGAGCCGT TTGTCGACGA TTTCCTCCAG CTCTCATCTC AACTCGATAT TCCGGTTATG CACGCTTTTA CTTTGGTGAG AGGCGTGCAA AGTGACATTG ACTCGGTGCT GATCCAAAGT GAATGCGAAT TGATCCAATA TGCTTACCGA GTTGCTGGCG TGGTAGGGTT AATGATGTGC CCGATTTTAA AAGCGGATAA TAAAGGGATG CCTTACGCCA TTGATCTGGG GATAGCATTA CAACTCACAA ACATTGCCAG AGACGTCCTT GAAGATGCTG AAATGGGGCG TCGGTATTTA CCTTATCAGT GGTGTCCGAT TGCACCTGAA GACATTGCCT CGGATGAGGG GGAATCTGTG AGAACCACAG TAAGTGATGC GATAGTGAGA CTGTTGACGC TTGCAGACCA ATACTACACT AGTGCTCGTC AAGGGTATCA ATTCCTCCCA CCACCAAGTC GTCGTGCAAT CATTGTTGCG GAGTCTGTAT ACCGGCAAAT TGGAGTCAAA CTTAGAAAAA GGGGCTTGCA GTACTGGAAA GGCCGAACAG TAGTAACGCC GTTTTCCAAA GTTGCCGTTG CTATGTCCGC TCTATCAACC AGTGCTCTCG AAGCGACTGG AGGACATGAT GCTTGCCTTC ACCAGCCTTT GGTTCTTTTA AGCGAATACA AAAAGTTTAG GAGCGAATTT GATGGTAACA CTTAA
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Protein sequence | MENTALKCLS NHGKTWRFAS FLLSKQQVEQ AARLYYFCRC IDDIADSTAN KQLAFESLEE VQRQLSLGKS DEPFVDDFLQ LSSQLDIPVM HAFTLVRGVQ SDIDSVLIQS ECELIQYAYR VAGVVGLMMC PILKADNKGM PYAIDLGIAL QLTNIARDVL EDAEMGRRYL PYQWCPIAPE DIASDEGESV RTTVSDAIVR LLTLADQYYT SARQGYQFLP PPSRRAIIVA ESVYRQIGVK LRKRGLQYWK GRTVVTPFSK VAVAMSALST SALEATGGHD ACLHQPLVLL SEYKKFRSEF DGNT
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