| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02104 |
|---|
| Symbol | |
|---|
| ID | 5554477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2105037 |
|---|
| End bp | 2108165 |
|---|
| Gene Length | 3129 bp |
|---|
| Protein Length | 1042 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640907591 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001445296 |
|---|
| Protein GI | 156974389 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAA GCGAACCATT ACCTTTCCAC CAAGAGGCAG CATTACCTTT AACCTCATAT
CAAAGCTGGT TGCTATCCAC TCAAAGGCAG CGCAGCGAAC AAAGGTCGAT AGATAATTTT
ATCTATCAAG AATTTGATTA CACAAATACA TCTTGGGACA CCTTTAAACC TTGCCTAGAG
GTTTTAATTA ACCATCACCC GATGCTTAAG GCCACTATCA GCGACGACTT CTTCCTCCAA
CAATCTAACA AGCATCATGT AGACGCGTTC GCCGTCAATG ACTTAACCAC TGCTTCTGAA
GAAGAGGCTA TTGAAAAGCT GAAGCACGCC CGCACTGAAC TGACAACAAG CCGTTCGTCC
GCAACGGTTT ACTTGGTCGT GAGCCTTTTG CCATCAAATA CCATCAGGCT GCACGCTCGT
TTCAACTCTG TTGTCGTCGA TATGCCAAGT GTGATGCTGT TTTTTGAACA ACTTGCTCAA
ATGTTACAGG GCACAAGTCT GAGCTTTGCT ACTGAGGAGC AAGTATTCGT ATCGCATCAA
CAGTTGGTCG ATAGTGAGTT GGTCAAGACA CCATCGAACA GCAGTAACGA CTGGGAAGAA
CATTTACTCA ATCTACCAAG TTCCGCTAAT GTCCCAACGC TTTGTGAACC GGAGAAGCTG
ATTGAGACAG GCGTAACAAG GCGAACATTA GCGTTGCCAA CAGACAAATG GCATCGGATA
GTCAAATACA GCCAAGCCTA TGAGGTTACA TCAGAACTGA CATTAGCGAG CGTGTTCGCC
GCAGTACTCT CCCTGTGGGG GCAACAGAGA GAGATGATGT TAAGGTTTGA TTGCCATAAA
AACACAGCTC ACCTTGATGT TATGGGTCAA TTTACTCAGC CGCTATTGGT CAGCCTATCA
GGAATCAATC AGCGTTTTGT TTCACTTGTA AAAGAGAACC AAAGTCACTT CGAACAAGCT
CAATCGTTTC CAACCATGGC GATTTTCCCA CTTGTCCAAC AATTAGCAAA GTTTTCAGAA
TCCCATCGCT ATCCAGCCAA CATCGCTTTT TCTAGTCAGC TATCAACCGT CAATCAAAAA
CCAGAATGGG GCTGTTACCA ATCAGCAAAT ACATGGCTCT CCCTGCATGC CACTATTTCA
CAAAATGGGC TCGAATTGCA TTGGGACAGT CAGGATGCCC TTTTCCCAGC AGACATGATA
CAAGATATGC TGTGCACCTT CTCCGAACTG CTCGAACATC TCAGCCAAGC GGAGAGTCAC
TGGAATCAAC CTTTACCCGT ATCGCTGCCT AAAAATCAAA TCTCGGTGCG TCGTGCTATC
AACAACCAAG ATAACCAACC TCTGCCAGAA GGTTTACTCC ATCATGGTTT CTGGGAAAAC
GCCGAGCGCT TCCCTAATGC TACGGCAGTT ATCCACGGCA AAATTTCACT CAATTACCAA
ACGCTAGCGG ACTACGCAGA GCGTTGTGCT AAGACATTGA CACTAGCAGA CGTTGAACCG
GGAGATCGTG TCGCGATCAG CATGGATAAA GGTATTGGCC AGATTGTCGC GGCCTTGGGT
ATTTTGTATG CAGGCGCTAT TTATGTGCCG GTTTCTCTCG ATCAACCCAA GGAAAGGCGT
GAAGGTATTT ATCTAGGCGC AGGTATCAAC GTGGTCATTA CCGACGATGC GGCTGTGACA
GATGCCACAT CAACCGACGG CTTCACTTAC CTCACATGGC AACACGCGAT AGAAAACAGC
CCACTGGACA AGTCTCCAGA AGTAGACCCA GAGCAGCCAG CTTATATCAT TTACACTTCG
GGCTCGACAG GCACACCAAA AGGGGTGGTG ATTTCTCACC AAGGTGCTCT CAACACCTGT
ATCGCCCTGA ATCAACGTTA CCAAGTCGAC CATAACGATC GTGTGCTTGC TCTCTCAGCG
CTTCACTTCG ATCTCTCTGT TTATGACATC TTCGGCTTAT TGTCCGCTGG TGGTGCGGTT
GTGTTAGTGA ATGAATCGGA CAGAAGAGAC CCAAGTGCTT GGTGTAAAGC GGTTGAAGAT
CACAACGTCA CGATGTGGAA TAGCGTTCCA GCCCTTTTCG ATATGCTTTT AACCTACTCT
ACGTGTTTTA ACTCCAAGGC CCCTTCTCGT CTTAGGTTAA CCATGCTGTC AGGCGACTGG
ATAGGGCTCG ATCTTCCTGC TCGTTATCGC CAGTATCGTT CTGATGGGAA ATTCATCGCA
ATGGGTGGGG CGACCGAGGC GTCGATTTGG TCTAACGTAT TCGATGTTGA GCAAGTCCCG
AATGACTGGC GTTCTATCCC CTACGGATAC CCTTTACCAA GACAGCAATA TCGTGTGGTT
GACGAGCTGG GGAGAGACTG TCCTGATTGG GTACCCGGAG AGCTCTGGAT TGGCGGTGAT
GGCGTAGCAC TCGGGTATTT TAATGATGAG CCGAGAACCC AAGCACAATT TTTAATACTG
GATGGCCAAC CTTGGTATCG AACAGGAGAT ATGGGGTGCT ACTGGCCTAA TGGCACGCTC
GAATTTTTGG GACGCCAAGA CAAACAAGTC AAAGTCGGTG GCTACCGCAT TGAGCTAGGT
GAAATCGAAG CCGCACTTAA TACGATTCCT CAAGTGCAGC GAGCAGTTGC ATTGGCAGCA
GGCAAAAAAG ATAAGACACT CGTCGCTTTT GTTGTTACGG ATTCAGCACA AACGGCAACT
AAACCTCTGA ATACTGAGGA CATACAACGC CAGTTGAAGG ACCAATTGCC AAAATACATG
CTGCCTCAAC GCATCCTATT GCTTGATGCA TTGCCTCTTA CCGCCAATGG TAAAGTTGAT
CATAAAGCAC TCGCTCAGAT GACAAGTCGT AAAAAAAGCC AATGTTCGAA CTCAGAAAAG
CCATTGGTTT CTGACAGCGA ACTCAAAATA GCAGAGCTTT GGGGTGATGT ACTCGGGCAA
CAAGCATTCC ATAAGCTCAG TGACTTTTTC CAATCTGGAG GTGATGCTTA TCGCGCAGTT
GAATTGGTTC AACGCTGTCA CAAAGCGGGA TACCCGATCA AATTGTCGGT ATTGTATCGT
TACCCCACGC TCGAAGCGCT CGCTCTCATA ATGGAGAGGT GCAAAATCAC AACACCTCAA
GGAGCGTGA
|
|---|
| Protein sequence | MTQSEPLPFH QEAALPLTSY QSWLLSTQRQ RSEQRSIDNF IYQEFDYTNT SWDTFKPCLE
VLINHHPMLK ATISDDFFLQ QSNKHHVDAF AVNDLTTASE EEAIEKLKHA RTELTTSRSS
ATVYLVVSLL PSNTIRLHAR FNSVVVDMPS VMLFFEQLAQ MLQGTSLSFA TEEQVFVSHQ
QLVDSELVKT PSNSSNDWEE HLLNLPSSAN VPTLCEPEKL IETGVTRRTL ALPTDKWHRI
VKYSQAYEVT SELTLASVFA AVLSLWGQQR EMMLRFDCHK NTAHLDVMGQ FTQPLLVSLS
GINQRFVSLV KENQSHFEQA QSFPTMAIFP LVQQLAKFSE SHRYPANIAF SSQLSTVNQK
PEWGCYQSAN TWLSLHATIS QNGLELHWDS QDALFPADMI QDMLCTFSEL LEHLSQAESH
WNQPLPVSLP KNQISVRRAI NNQDNQPLPE GLLHHGFWEN AERFPNATAV IHGKISLNYQ
TLADYAERCA KTLTLADVEP GDRVAISMDK GIGQIVAALG ILYAGAIYVP VSLDQPKERR
EGIYLGAGIN VVITDDAAVT DATSTDGFTY LTWQHAIENS PLDKSPEVDP EQPAYIIYTS
GSTGTPKGVV ISHQGALNTC IALNQRYQVD HNDRVLALSA LHFDLSVYDI FGLLSAGGAV
VLVNESDRRD PSAWCKAVED HNVTMWNSVP ALFDMLLTYS TCFNSKAPSR LRLTMLSGDW
IGLDLPARYR QYRSDGKFIA MGGATEASIW SNVFDVEQVP NDWRSIPYGY PLPRQQYRVV
DELGRDCPDW VPGELWIGGD GVALGYFNDE PRTQAQFLIL DGQPWYRTGD MGCYWPNGTL
EFLGRQDKQV KVGGYRIELG EIEAALNTIP QVQRAVALAA GKKDKTLVAF VVTDSAQTAT
KPLNTEDIQR QLKDQLPKYM LPQRILLLDA LPLTANGKVD HKALAQMTSR KKSQCSNSEK
PLVSDSELKI AELWGDVLGQ QAFHKLSDFF QSGGDAYRAV ELVQRCHKAG YPIKLSVLYR
YPTLEALALI MERCKITTPQ GA
|
|---|
| |