| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02052 |
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| Symbol | |
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| ID | 5556122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 2043021 |
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| End bp | 2048585 |
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| Gene Length | 5565 bp |
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| Protein Length | 1854 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640907539 |
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| Product | hypothetical protein |
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| Protein accession | YP_001445244 |
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| Protein GI | 156974337 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCGCA TACCTTTTTT TAATGGTTTA AAGTTTGATA AAACAAATAG TTACAGCTTT
AACTTTTTGA GAATAGGTAG TAGTTATGAG CCGATTCCCA TCAACGTAAA TTTTATCGAC
TATAACGCAG ACGGATATAT CGATTTTTAT GTCGATGGAA AAGTGCACAT CAACCAACGC
GTAGGTGAAC TTTTTGATAA ATCTAAATCG CTTAGCATGG TAAAAAACGT GTATCGAGTT
AGTGATATCA ATGGTGATGG AATCGACGAT TATGTTACGC ATGCTGAAGA CCGACCACCG
TTTAAAAAGT CAAAAGTACA CTTATCTACG GGCTTTGAGG TTGACCGCAT TAACATTATC
CAAGAATACG CCCGCACATT TAAAATCGAA TACAAACCAG CGTCGGATAA ATCTGTACAC
AAACAAAAGC GATACTTTGA TTACCCTTAC TTGAATACAA CACCAAGCAA GCAGTTGGTT
GCCAACGTGG TTAAGGAGCC CAAAGGATAT GCAGCAACCA GATACTCCTA CCACTATGAG
GGAGCAAAGT CGCATGCGCT AGGCGGTGGC TTTTTAGGGT TTGCAAAAAT TACCGAAGTA
GAGACTAACA ACGGCTCATT TGTTGTTGGC AATAAATACG ACTTTGTTAC CACAACAACG
GTCAGCGAAT ACCACCAGCT AGATTTAAAG AGAGCGGGAG AGCTAAAAAA AGTCTCGGTT
TACAAACAAG GTAAAGGTGC AAAATCGTTT GTTTATCGAG AATCTGATAA AGTGAGTGCC
ACGGACTTCA GCTACACATC AGTGGACAGA ACCAATAGTG CTTTTCAGGT CTACCCAAAC
AAAGTTGTTA AGAAAAGTTA TGAAAATGGG GCATTACAGA AAACAGAAAC CATTACTCGT
AAATTGAATG CGTTTGGCGC ATTAACGAAA GAAGAAAGTA CGCTAGTTAA CGCCAAAGAT
ACGCGTGATG CTTTTACCAC CACCATTGAC AACACCTATG TTTCTAGTGG ATATACGACG
ACATCTGTTA CATACAACAC GATATCGCGT CATCAGGTGT CGGATATGTC GGCGAAGTTT
GCACGTTATC AAGATGGGCT GACAGGGTAT TGTTCAACCA GTAACGATGA TGTTTACTTT
AAGCCAAACG ATAAATTCGC CCTCATACAT GGTGAGGTGG ATACCCCAAT TTTAGTGACG
CGTCATAACG AATATTACCG TTACCGTGTA GCTAAAAGCC AATCCAATTC TTACAGTGGA
ATCACGCAGC GAAGTGGAGA GCTAACTCAA ATCAGTCGTG CCGAGTTCGA GCGCCAGGCC
ACTAAACCTT GTGGTGACTT TACCTTTGGC AATATTATTG GTGATTCACA CCCTGAATTG
AGTACAACAA CGGCTAACTT ATCACAGCGA GTGACGCAGT CGGGTAATGA ATATTGGCAA
GTTGGGGCAG TAAAGCGCAC AACAAGTAAG ACGACAGCCC AACAGCATGG CTTAAGCAAA
CTTACCCTAC AAGATTACGC CTACACGCAG AACGGCTTGG TAAGTAGTGT TAGAACCAGC
GGCTCAGAAT ATGAGCCTGG TTCTGGTTCA GGTCGCACGC TCACGACAGC TTATCAATAT
GACGCTTGGG GTAACATTCG CCAAGAAAGC CAGTACGGCA GCGATCTTGC TCGCCGAACC
ACAACCTATG GTTATGAGCA AAATGGCCTC AAACTTAAAA CTACTACCAA CGCTAAAGGG
CATACCACTA CGTGGGAGTA CGATACCCAA GGTCGTCTGC TGTCTGAAAC TAGTCCACTA
AGAGGGCGCA AAACACGTTA CCAATACGAT ATGTTTGGAC GTGTAAAAGT GGCGACATTG
CCGGGTACTG GTAATACCGT TTCCACGGAC TATCAGTTAG GTGCGGTTTG TATGAACGCA
CTTGAGACCA CGGCACACTG TATTACGGAA AAAAAAGCCG ATGGCTCAGA ACAGCAAATA
CAGTTTGATT ATGCCGACAG AGAAGTCCGT CGCCTTCATC GAGCTTTTGA TGGTCGCTGG
GTAGTGGTAG ATTCTGAATG GGATCGGAAC GGTCGTAAGC GTTTTGTCAC GGCGGCAAAG
TTTTTAAACC AAGCTGGTGA TGCGCCACGA GTTACGTTTG ACTACGACCT CTACAACCGA
GAAGTCCGCC GAATAGAACC AGCAAATCGC GGTGGATTAG CGATATTTAC CACTCGTTAC
GATGGCTACA AAATAGAAGG CACGGATGCT CGTGGCTTTA AACGTAGCAC CACCCACAAT
GTTATGGGGC AGGTGATCCG TAAAAACGAG CCACTTGGTG CTTATCAAAC GTATCAGTAC
TACCCTGATG GCAAGCTAAG GCGTACGGTA GATTCTGAGG GGAACGTTAC TCAAGTAAAA
TACGACAACT TAGGTTATCG AACAGAGCTA GATGATCCGG ATATCGGCCA TTGGCACTAT
CGCTACAACG CACTAGGGCA GCTTGTTTAT AAGCGAGATG CGAATGGAAT CGTCACCACT
ATGGGTTACG ATACGCTGGG GCGTAAAGTT GCGCAGAGCG ACGGGAACGA GGCATCAGAA
TGGCGATACG ATGAGCGTGG TGCCCTAGGT AAACTATCTT GGATGAGTGG TAAGGGGCAA
AGGACAGATT ATTTCTATAA CTCCAACGGA CTATTACAAG AAAAAGCAGT CACAGTCGGG
CAAGAAATTT TCTCGACGCA ATATGAGTAC GATAAACTTG AGCGTCTAGG ACGAGAAGTC
CGTCCTGATG GTCAAACGTT AAAGTCTGCT CTTGGTAAAA AAGACGACCA GCGCTTAGCG
GTGGAGTATC TTTACAACCA ATTTGGCTAT TTGGGCGCGG TAAGAAGCCC AAAAACTTTC
GTTGATGATA TCTTTACCAG CGCCAAATTT CGCGAAGATA TCCGCCAACT TCTTACAGGG
GCGATCAACC AAGCGAATAC GTATCTACAA CGTGCGAGTC GATACGCAAG ACAGGAGCAA
TTCTTCCGCA CTAAGCAGTT AGAGTATGAA AGAAAACGGG TTGACGTTTA CAACCTTGAT
AGCGCATCTG CAGCGTTACT AAAAGATAAT TACCGTTATA AACAGTGGTG TGATGGACAG
AACACGTGCT ACTTACGCCC AGCAACTTGG GTAATGTTGC ACGATGACAT CACTATCCCT
CTGGATGTCA CGCTCGAAGG TCAGGTTTAT CGAATTACCA GCGAAAAAGA TGGTGATATA
TGGGATGCCT TTACATCAGG GCTACAAGCA CATGATCTGA CAGCAACAGC CATTTCTGAG
CAGGAATTAG CTGGGCTTAG CCTTACGCCG ATGAAGGACA TGCTTTTATC TGGCGATTAC
GATGAGGATG GCCAGCCAGA CATAATGCAT CAAGACGATA TTTATTCGGC GAAAGCGGAC
GATGAACTGC GTGGTGAATT ATTATTCGCA GCAGAAGATC TTGAACAAGC CGCTAATATT
GCTAACCGCC ATTACAAGCA ATACAAAGCA CTGGCGGCTG ACATGATTGG GTTGTCGGAG
AAAGTCGCGA AACTGAGTGG CTTATATTGT GAGTTTGCTA ATGACTTAGC TGGTAACCGA
GTAGATGCGA GTCTTCGTAA AGAGTGCAGA AGCAATGGTG GTGTGAGCCA AGCCGATATG
TTGGATACGA TTTTAACCAA CGCGGAATTG GCTACGGCAA ATAAAAATAA CGCCTACGTT
TATTATTGGC AGCGTCAATC GACCGATGCT TTTGACCACA CACTCAGTGA AATGCTGGGT
AACGGGTTGA TGAACACGTA CGATTACGAT GCAGACACCG GACGCATGAA TGCGATAGCA
ACTTATCAGG GTAATCATGT CTACAGCTCA GATAGAATAA GCAAGCCATC TCGAAATCAG
CATATTCGTT ACTTGCGTTA TCAATACGAT GAGCACAACA ACGTCACTCA GCGCTTTGAT
GATCAACTCG GTATCACAGA CATTTGGACC TATGATGCGT TAGACAGAGT CGAGACCAAC
ACCATGGTTC TGATTGATAA GGCTCGCCAT GGTCTTAACA ACCCGGATCT GACAGGTAAA
CGCAGCTTCG AATATGACAA GCTGGGTAAT ATTCGCCGCA AATCAGACGT GGGTGTTTAT
CAATACTCTG GAGTGGGAGC GGGTCCGCAT GCTGTCACCA ATGCAAATGG TTTAGACTAC
AGCTACGATG CTGTGGGTAA CATGACCAGT GCGAAAGCGA AAGGCAGCAA ATCCAATGAG
CGAACGATGC GTTGGTCGCC GTTCAATAAG CCGATCAAAA TCGTGCGTGA GGGTAAGTCG
GTAGAGTTTT CTTATGATGC GAACCACGAC CGTTACTTAA AGCGAAGCTC AGACGGTAAA
GTTACCTTCT ACTTTGGCAA AACTTATGAA CGAGAGAAGG ACCTTAAAAC AGGGGAAATA
CAACACAAGC ACTTTATTTT CGCTGAGGGT AAGTTAATTG CGTTAAACAC CCAAACTGTT
GATAGCAAAA ATCAGCTTAA GAATAAGCAA GTGCGCTACT TGCACTACGA TGCGCTGGAT
TCTGTTGACA TGGTGACCGA CGGTTACGGC TTAGTTGTAG AAAAACGCAG CTATGATACT
TGGGGTAAAC AGCGCCACGT TGAGTGGCAA GATAAAAGTG CCGCGAGCGT TGTCCAGTCT
GCGATTACCA ACCGAGGTTA CACTGGGCAT GAGGAAATCA CTGAAGTTGG ATTAATACAC
ATGAACGGAC GTGTGTACGA CCAAGAGTTA GGGCGCTTTA CGAGCGCAGA TCCACTTGTT
CAGTCGCCGT ATGTGGTGAA TAGCTTCAAC CGCTATGCAT ATGTGATGAA TAACCCGCTC
AAGTACACAG ACCCAACAGG TTTGAGTAGT GAGGACTCTG GGGTTAATTC AGGTGATTCA
GAGACCAATG GGGATAGCGA AGATAAAGGC TCAAGTAGCG GCAGGCAAGA AGGTAATCGT
GGCGGTGATT CAAAAAGCGA AGATGCTGAA GGCGATAAAA CCAAATCCGA CGATGTGTCA
TCTGATAGTA TTGCTAGTAA GGCTAAGGAA GTAAGAGATG AAATGGCGGC AGTCTATGGT
CTTGCAGGCA TGATTCATAA TGGAGCTTCA GAAGATGTTG TAAACTCCAC GGCAAACAGC
CTAAACATGA ATGCAAAAGA CGTCCGGGCT GCCATGCGAA CGGCGAAGGT TATGGCCGCT
GTTGGTGGAG CTTTTGGAAA GGGGAAAGGT AAAGTAAATG TAAATGTAAA TGTTCAAGGT
AGAGTTGAAA AGAAAACTCC GTCAGTAGAT GAGCTATCTG AAGAAGCTGC AAAACCAAGT
AAAAATGGTT TTACAGAGGC TGGTCGAAAT CTTCAAAAGC ATAGCAACCG ACCCGGAAGT
AAGTGGAACC AGGATGATAT AAATACCAAT AACCCAAATC TGGCTAACCC CAGAGCACAG
AACTTGGTGG ATGACGCTCT CACGACCCCA GGGACTACGG TTACCTCTAA TCCGAGGGGG
GGGGTGGGAT GTAAATACAC CAGATGGCAG GACAATTCGT TATAA
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| Protein sequence | MGRIPFFNGL KFDKTNSYSF NFLRIGSSYE PIPINVNFID YNADGYIDFY VDGKVHINQR
VGELFDKSKS LSMVKNVYRV SDINGDGIDD YVTHAEDRPP FKKSKVHLST GFEVDRINII
QEYARTFKIE YKPASDKSVH KQKRYFDYPY LNTTPSKQLV ANVVKEPKGY AATRYSYHYE
GAKSHALGGG FLGFAKITEV ETNNGSFVVG NKYDFVTTTT VSEYHQLDLK RAGELKKVSV
YKQGKGAKSF VYRESDKVSA TDFSYTSVDR TNSAFQVYPN KVVKKSYENG ALQKTETITR
KLNAFGALTK EESTLVNAKD TRDAFTTTID NTYVSSGYTT TSVTYNTISR HQVSDMSAKF
ARYQDGLTGY CSTSNDDVYF KPNDKFALIH GEVDTPILVT RHNEYYRYRV AKSQSNSYSG
ITQRSGELTQ ISRAEFERQA TKPCGDFTFG NIIGDSHPEL STTTANLSQR VTQSGNEYWQ
VGAVKRTTSK TTAQQHGLSK LTLQDYAYTQ NGLVSSVRTS GSEYEPGSGS GRTLTTAYQY
DAWGNIRQES QYGSDLARRT TTYGYEQNGL KLKTTTNAKG HTTTWEYDTQ GRLLSETSPL
RGRKTRYQYD MFGRVKVATL PGTGNTVSTD YQLGAVCMNA LETTAHCITE KKADGSEQQI
QFDYADREVR RLHRAFDGRW VVVDSEWDRN GRKRFVTAAK FLNQAGDAPR VTFDYDLYNR
EVRRIEPANR GGLAIFTTRY DGYKIEGTDA RGFKRSTTHN VMGQVIRKNE PLGAYQTYQY
YPDGKLRRTV DSEGNVTQVK YDNLGYRTEL DDPDIGHWHY RYNALGQLVY KRDANGIVTT
MGYDTLGRKV AQSDGNEASE WRYDERGALG KLSWMSGKGQ RTDYFYNSNG LLQEKAVTVG
QEIFSTQYEY DKLERLGREV RPDGQTLKSA LGKKDDQRLA VEYLYNQFGY LGAVRSPKTF
VDDIFTSAKF REDIRQLLTG AINQANTYLQ RASRYARQEQ FFRTKQLEYE RKRVDVYNLD
SASAALLKDN YRYKQWCDGQ NTCYLRPATW VMLHDDITIP LDVTLEGQVY RITSEKDGDI
WDAFTSGLQA HDLTATAISE QELAGLSLTP MKDMLLSGDY DEDGQPDIMH QDDIYSAKAD
DELRGELLFA AEDLEQAANI ANRHYKQYKA LAADMIGLSE KVAKLSGLYC EFANDLAGNR
VDASLRKECR SNGGVSQADM LDTILTNAEL ATANKNNAYV YYWQRQSTDA FDHTLSEMLG
NGLMNTYDYD ADTGRMNAIA TYQGNHVYSS DRISKPSRNQ HIRYLRYQYD EHNNVTQRFD
DQLGITDIWT YDALDRVETN TMVLIDKARH GLNNPDLTGK RSFEYDKLGN IRRKSDVGVY
QYSGVGAGPH AVTNANGLDY SYDAVGNMTS AKAKGSKSNE RTMRWSPFNK PIKIVREGKS
VEFSYDANHD RYLKRSSDGK VTFYFGKTYE REKDLKTGEI QHKHFIFAEG KLIALNTQTV
DSKNQLKNKQ VRYLHYDALD SVDMVTDGYG LVVEKRSYDT WGKQRHVEWQ DKSAASVVQS
AITNRGYTGH EEITEVGLIH MNGRVYDQEL GRFTSADPLV QSPYVVNSFN RYAYVMNNPL
KYTDPTGLSS EDSGVNSGDS ETNGDSEDKG SSSGRQEGNR GGDSKSEDAE GDKTKSDDVS
SDSIASKAKE VRDEMAAVYG LAGMIHNGAS EDVVNSTANS LNMNAKDVRA AMRTAKVMAA
VGGAFGKGKG KVNVNVNVQG RVEKKTPSVD ELSEEAAKPS KNGFTEAGRN LQKHSNRPGS
KWNQDDINTN NPNLANPRAQ NLVDDALTTP GTTVTSNPRG GVGCKYTRWQ DNSL
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