Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01981 |
Symbol | |
ID | 5553095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1978968 |
End bp | 1980320 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640907468 |
Product | hypothetical protein |
Protein accession | YP_001445173 |
Protein GI | 156974266 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATT TACAACACCT AATCAGCAAC ACATTCAACA GGCCACTCGC CTTAGAAGCT GGTTACGCTC GGGTGTTCTT CTCGGCGCTC AGTCAACGTC TAGGCAATGT GGTCCAGATA ACGGACACAG AAGGGCAAAT CCTGCGTGAG AACGACATAA AAAAAGTCGC TTCTGGCTTT TCGCGGACTC GTAGCGGTAG CCGCAGCTAT CAAGTCTCTC AGGGTATCGC CATCATTCCG ATTGATGGTT CGTTGGTTCA TAAGTATGGC CACATTAAAC CCTACTCGGG GATGACAGGG TACGACGGCA TTATGCACCG CTTGCGAGAA GCGGTCGCAG ACCCCGAAGT CAAAGCCATG TTGCTGGATA TGAACACACC GGGCGGCATG GTCGCAGGTT GTTTTGATTT GGCTGACAAA ATCGCAGAGA TGCGCAAAAT CAAGCCTATC TGGTCACTCG GTTACGACAT GCACTGCAGT GCAGGCCAAA TGATTGCGAG TGCGTGTTCA AGGCGCCTTA TAACTCAAAC GGGCATCGCA GGCTCGGTGG GCGTGATTAT GGCGCACACC AACATCGAGA AGATGCTGGA TCAGCAAGGT GTGGAAATCA CCCTTGTGAC GGCAGGTGAC CATAAAGCCG ATGGCAACCC TTACCAATCT CTGCCGAGAG AGGTGCGAGA GAAATGGCAA TCCGAAGCAG AGAGCACACG TCAAATGTTC GCAGGTAAAG CCGCCGAGTA CATGGGCGTC GACATTAAAA CCATTCTATC GACTGAGGCG CAGGTCTATG AAGGCCAAGC CGCAGTAGAT GTTGGCTTCG CAAACGAAGT CGTCAACGGT CTTGATGCTG TTCAGATAAT GACTGAACAG TTCAAGAAAC AACAAACCAC CTTTGATATG GGAGCCGCTA TGACGGTGCA AGCAGAACAA CAACCAGTCG CAACGGGTGA GCAAGGCAAT CCACAACAAG CCGCCGCTCC AGCGACTCCG CAAACTCCAG CTGAAGAACA GCAACCCACT CCAGAACAGC CACAAGCAAG CGCGCACAAT GATGAGTCCA CGGACCCAGC CACAAAAGAG CGCGAACGCT GCATGGGCAT TATTGGCCTA GAAGAAGCCA AAGGGCGTGA AGCGCTCGCG CAGCAACTTG CCAGTAACCC CAAAATTAGC GTTGATGAAG CCAAGGTCTT GCTTGCTTCA GTACCTGTTA GTGCTACTGC GCAAAACGAA TCGGCATTAA TGGCACTGGC TTCAGAGCAC GGTGAACCTC TTGGTGATGA TGTTGGTTCC GGTGATGTCA CCGAAGAGCA AAAGAACATC AAAGCGCTAG CGTCTTCATA CACACGCATT TAA
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Protein sequence | MNNLQHLISN TFNRPLALEA GYARVFFSAL SQRLGNVVQI TDTEGQILRE NDIKKVASGF SRTRSGSRSY QVSQGIAIIP IDGSLVHKYG HIKPYSGMTG YDGIMHRLRE AVADPEVKAM LLDMNTPGGM VAGCFDLADK IAEMRKIKPI WSLGYDMHCS AGQMIASACS RRLITQTGIA GSVGVIMAHT NIEKMLDQQG VEITLVTAGD HKADGNPYQS LPREVREKWQ SEAESTRQMF AGKAAEYMGV DIKTILSTEA QVYEGQAAVD VGFANEVVNG LDAVQIMTEQ FKKQQTTFDM GAAMTVQAEQ QPVATGEQGN PQQAAAPATP QTPAEEQQPT PEQPQASAHN DESTDPATKE RERCMGIIGL EEAKGREALA QQLASNPKIS VDEAKVLLAS VPVSATAQNE SALMALASEH GEPLGDDVGS GDVTEEQKNI KALASSYTRI
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