Gene VIBHAR_01975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01975 
Symbol 
ID5552875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1973689 
End bp1974168 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content47% 
IMG OID640907462 
Producthypothetical protein 
Protein accessionYP_001445167 
Protein GI156974260 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCACC TTAATTCTGC CGTCAAGATG TTAGCAGCCG CAGGGGCTTC GGCTCTTATT 
ATGGCGACAG CAATGATAAA GCCAATGGAA GGTGTTCAGT ATACTCCTTA CACCGATGTC 
GCTGGCGTTC AAACTGTTTG TTACGGACAT ACAGGAACAG ACATCATCTC GGACAAAGTC 
TACTCACAAG CCGAGTGTGA TGAATTGCTC GAGTCCGACT TGGCTGCTGT TAAGCGAATG 
GTCGACCCGA TGATTCACGT TGATATCCCT GAGACGACAC GAGCTGCTCT CTACTCATTC 
ACGTTTAACG TTGGCATAGG CTCATTTTCA CGCTCGACGT TACTAAAGCT ACTTAACAAA 
GGTGAATGGT ATGCAGCATG TGACCAGCTT AAACGATGGG TATACGCAGC AGGCAAACCT 
TGGAAAGGAT TGATGAACCG ACGAGATATA GAGAGGCAAG TATGCCTAAT GCAAAGCTGA
 
Protein sequence
MKHLNSAVKM LAAAGASALI MATAMIKPME GVQYTPYTDV AGVQTVCYGH TGTDIISDKV 
YSQAECDELL ESDLAAVKRM VDPMIHVDIP ETTRAALYSF TFNVGIGSFS RSTLLKLLNK 
GEWYAACDQL KRWVYAAGKP WKGLMNRRDI ERQVCLMQS