Gene VIBHAR_01780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01780 
Symbol 
ID5556326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1792297 
End bp1793433 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content37% 
IMG OID640907271 
Producthypothetical protein 
Protein accessionYP_001444976 
Protein GI156974069 
COG category[S] Function unknown 
COG ID[COG4938] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGA GCATCAAGCT TCATAATTTC AAGTGTTATC AAGATTATTA TTTTAAACTG 
TCTTTATTAA CGGTTTTTTG TGGGTCTAAT TCGGTGGGGA AAAGCACTGC TATTCAAGCC
TTATCAATTC CACTTCAATC TCGTTTTGGC TCATATGTTG CTCTGAATGG GGCTCTTACC
GAGGTTGGAT TTATAAAAGA TATTCATAAC AAAGAAGAGC AAGATGAAAG ACTGGAAATT
GAACTATCAG TATCAGGTAT AAAAAAATCT TGGGGTTATG ATGATTTCGA TGCACATAAA
ACAACTTCTC CAGATCGATT GAAAGAGCTT TCAAGTATAG GGAATCCAGA AGTTTATCAA
GACCTACTGG GTAAATTTCA GTATTTACAA GCAGAAAGGC ACGGACCACG AAGTAATTTT
GATATTACGG ACTCAAATCG TTTCCATAAT GATTGGCTGG GCGCTAAAGG AGAATTTACT
GCAGAGTTTC TGTCTCAATC ACTATCTAAA AAAAGGTTGT TTGTCGGTGG CGTTGAAACA
CCAGAGGATT GCAAAGATGA CCCAAGAATA CACACCAACG AAAATAAGCT AGCATTACAC
AATCAAATTG ATGCTTGGAT GCAGGAAATT AGCTCAGGTA TATCAGTGTC CTCCTTCTTG
TATGAAGAAG CATCTACTGC TGTCAATGTA TTTGGTCAAA ATGGAAATGA ATCTCTAAAA
CCACAAAATG TTGGATTTGG TGTGAGCTAT GTGCTTTCTA TTGTGACAGC ATTACTGTAT
ACAAAAAAGG GTGGAGTCGT AATTATAGAA AACCCTGAAG CTCATCTTCA CCCTAGAGGT
CAAAGTTATT TAGGAAGGCT TATTGCGTTG ACGGCTAAGT CTGGCGTTCA AGTTATTGTC
GAGACACATA GCGATCACTT ATTAAATGGC ATTCGAGTGA TTGGTCGGAT TGATGATAGT
TTTGATGCTG AATTGTTTAC ACTTTATTAT ATATCACAAG GACAGAAGCA GAGTAATGTA
GATATTATTT CTCTAAACAA GGAAGGTAAG CTTTCTGAAT GGCCTAGTGG TTTTTTTGAT
CAGCAAGCTC AAGATATGTT TACAATTATG ACTGGAAAGC TTGAGTATCC CAAGTAG
 
Protein sequence
MIESIKLHNF KCYQDYYFKL SLLTVFCGSN SVGKSTAIQA LSIPLQSRFG SYVALNGALT 
EVGFIKDIHN KEEQDERLEI ELSVSGIKKS WGYDDFDAHK TTSPDRLKEL SSIGNPEVYQ
DLLGKFQYLQ AERHGPRSNF DITDSNRFHN DWLGAKGEFT AEFLSQSLSK KRLFVGGVET
PEDCKDDPRI HTNENKLALH NQIDAWMQEI SSGISVSSFL YEEASTAVNV FGQNGNESLK
PQNVGFGVSY VLSIVTALLY TKKGGVVIIE NPEAHLHPRG QSYLGRLIAL TAKSGVQVIV
ETHSDHLLNG IRVIGRIDDS FDAELFTLYY ISQGQKQSNV DIISLNKEGK LSEWPSGFFD
QQAQDMFTIM TGKLEYPK