Gene VIBHAR_01404 details

Gene Information

• Locus tag: VIBHAR_01404
• ID: 5553972
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1420959
• End bp: 1422881
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640906896
• Product: hypothetical protein
• Protein accession: YP_001444607
• Protein GI: 156973700
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG4771] Outer membrane receptor for ferrienterochelin and colicins
• TIGRFAM ID: [TIGR01783] TonB-dependent siderophore receptor

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTATGC CTTCTGTTTT AACGGGAGCG CTTTTGACAG CGTTCAGTGG CTCTGCGCTT 
GCGAACGATC AAGACGAAGT GGTGGAAATG GAGCGCATGG TGGTAACCGC GTCACTTACT 
CAGCACTCTG AGTTAACCGC GCCAGCTTCC GTTTCGGTGA TCACCGCCGA TGATATTTCG 
AAGATGCCAG TAAAGGATAT CTCGGAAGCG ATTCGCAGTG CGACAGGTGT TAGCGTACTG 
AGCGGCACCG CTTACGGTCG CAATAACATT CGTATTCGTG GTCTTGATTC TAAACACACT 
TTGGTGCTAA TCAATGGGCG TCGCATCAAT TCTCAGGATG CGTTGATCCG TGGTAATGAC 
TTTGACCTAT CGAGTATTCC TCTTACCGCG ATTCAACGTA TTGAAGTCGT CCGTGGCCCG 
GTATCGTCTC TGTATGGTTC AGAAGCGATG GGTGGCGTGG TGAACGTGAT CCTGAAGTCA 
CCGACTGAAG AGCTATCTGG CTCGCTTGGC CTTGAATACG AAAGCATTCT TGAAGGTGAT 
GGAGGTGATG GTTTGAAAGG TCACGCCTAC GCAAGTGGCA CGCTGACGGA AAATGTTGAA 
GGTAGTATTA TTGTGGAAAG TTCGGCTCGT GACCCATGGC GTACCGACAC GAATCCAGAC 
TTCGATGCAT TGGAGCAGAA AGACACCACC AATGTCTTTG GTGAGCTTGT TTGGCAACTG 
ACAGAAGAAC AACGCCTGAT CGCGGATGTG ATCTACACCA ACGATGAGCG TGAAGCGGAT 
TGGGCCTCAC ATACGAACAC TCAAGATTCC ACGCGTTGGA ATTACGGCCT GACCCACGAA 
GGCGCTTGGG ATACCGTTGA CTCACAAGTG CGTTTATACG GCGAGAACAT GCAGCTGGAT 
GATGCAAGCA CGGCGTATAT CAATGGCGCA GCGGACGTTG AACTACAAAA CAACACACTT 
GATTTTAAAC TTTCTGGTTT GTTGCGTGAC TCGCACGAGT GGGTATTCGG TGGTGAATAC 
CGCACATCGG AGCTGAAAAA TAGCCGTGAT GTTCCGTCGG GTGATATCGA CAACTATCAA 
GGAGCGGTCT TTGTTCAAGG CGAGTTTGAC CTCAATAAAT TGGCGGTGAC TTTAGGTGGT 
CGTCAAGATT TTCATGAAGT GTATGGCAGC CACTTTAGCC CACGTGCTTA CGCGGTTTAT 
AGCTTGACGG ATGAGTTTGT TCTGAAAGGT GGCTTTGGTG GTGGCTTCCG TGCTCCAGGC 
ATGATGGAGA GCAGCGATCA AGTTCGAGTG ATCAGTTGTC GTGGCGGTTG TTGGTTAACT 
GGTAATGAAG ATCTAAAACC GGAAGAATCA GAAAGCTACG AAGCTGGCCT AGCGTATGAG 
ACAACAGCGA TGGGTGTTGG TCTGATGTAC TACCATACCG ACTTGAAGAA CAAGATTGAG 
CGAGACCTAA CTAAGCCAGT AGGTTCGGTG GGTCAAACGT CTATTTTCAC GTATCAGAAC 
ATCGGCAAAG CGGAGACCAA AGGTTTTGAA CTAGAAGGTT GGTATGACAT TACCGATAGC 
ATCAACCTAA AAGGTAACTA CACCTACACG GACGCGAGAG ACAAGAGCAG TGGTGATAAG 
CTAACTAAAA CACCTGAGCA TTTGGCAAAC CTAGATGTCA ATTGGGAAGT CTTCGATTCA 
TTCACCACCT TTGCCCGCGT GAACTACATT GGTAAACAAG TCATCACTAA CCAAAGACGT 
GAAAACAAAA CGGTCGATGG CTATACGCTT GTTGGCTTGG GTGTGGCTTA CGATTTCCAA 
CAATTTAACC TAAAAGCGGG TTTGAACAAC ATCTTTGACG TAGAGTTGGA TGATGAAGAT 
GATTACTACG GTTATTCTGA GAAAGGCCGC AGTGCGTACG TAAGCGCAAC GTACCTGTTC 
TAA 

 

Protein sequence

MFMPSVLTGA LLTAFSGSAL ANDQDEVVEM ERMVVTASLT QHSELTAPAS VSVITADDIS 
KMPVKDISEA IRSATGVSVL SGTAYGRNNI RIRGLDSKHT LVLINGRRIN SQDALIRGND 
FDLSSIPLTA IQRIEVVRGP VSSLYGSEAM GGVVNVILKS PTEELSGSLG LEYESILEGD 
GGDGLKGHAY ASGTLTENVE GSIIVESSAR DPWRTDTNPD FDALEQKDTT NVFGELVWQL 
TEEQRLIADV IYTNDEREAD WASHTNTQDS TRWNYGLTHE GAWDTVDSQV RLYGENMQLD 
DASTAYINGA ADVELQNNTL DFKLSGLLRD SHEWVFGGEY RTSELKNSRD VPSGDIDNYQ 
GAVFVQGEFD LNKLAVTLGG RQDFHEVYGS HFSPRAYAVY SLTDEFVLKG GFGGGFRAPG 
MMESSDQVRV ISCRGGCWLT GNEDLKPEES ESYEAGLAYE TTAMGVGLMY YHTDLKNKIE 
RDLTKPVGSV GQTSIFTYQN IGKAETKGFE LEGWYDITDS INLKGNYTYT DARDKSSGDK 
LTKTPEHLAN LDVNWEVFDS FTTFARVNYI GKQVITNQRR ENKTVDGYTL VGLGVAYDFQ 
QFNLKAGLNN IFDVELDDED DYYGYSEKGR SAYVSATYLF