| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00167 |
|---|
| Symbol | |
|---|
| ID | 5555246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 169034 |
|---|
| End bp | 170860 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640905663 |
|---|
| Product | cyclic nucleotide binding protein |
|---|
| Protein accession | YP_001443442 |
|---|
| Protein GI | 156972535 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACA AATTTAACAT GCAATCTCCA CCGTTCAACC GCCTGACTGA CGCACAGCAA
AATCGACTGC GCTCGTCTCT TGATGTGGCG TACTACCGAA CGCGAGATGT CATCTTAGCT
TGTGGGCAAG ACAACCCTCA CTTGCACGTG CTGATTAAAG GCGCAGTGGA AGAGCGCTCC
AAAGATCAAG ACGAAGTGTT TGCTCACTAC GCTAATGACG ACATGTTTGA TGTGCGCTCT
TTGTTTGAAG AAAGTGTACG CCATCAGTAT GTGGCACTGG AGGATACCCT CTCGTACTTG
CTGCCCAAGG GCGTGTTTCT TGAGCTGTAC AACGAGAACG GACAATTCGC CGCCTACTTC
GATAACAACT TATCCAAACG CCAAGCCCTC ATTGAAGCGG CTCAGCAACA ACAAAACCTT
GCCGAATTCA TTCTGACTAA AGTCGATAGC AGCATCTATC ATCCACCGAT GCTATTAGCT
GCTGATATGC CAATTAATCA GGTCACCAAA ACACTCAAAG ACAATGGCAT TGACGCTGCT
TTGGTTCAGC TTAACCAAGA TGACCCACGC CTAGAGCAAC ATCCATCGGC GCATCCCTAC
GCGATAGTGA CGCGAACCAA TATGCTCCAT GCCGTGATGC TTGACGACCA CCCACTCGAT
ACGCCAGTGA GTGAGATTGC GACCTTCCCT GTTTATCACG TGGATGATGA TGACTTCTTG
TTTAACGCCA TGATCACCAT GACACGCAAT CGCATGAAAC GTCTAATGGT GTGCGAAGGC
AATCAAGCGG TCGGTATGTT GGACATGACG CAAATCCTCA GTGCGTTTTC CACTCACTCA
CACGTACTGA CACTCAGCAT AGCGAGAGCC AGCAGCGTGG AAGAGTTAGC CCTTGCTTCC
AATCGACAGC GTCAGTTGGT GGACAGCTTG CTGACCAATG GTATCCGCAC TCGCTTCATC
ATGGAGCTGA TATCTGCTGT AAATGAACAA ATCATCGAAA AAGCGTTTGA GCTTGTGGTG
CCACCAGCAC TGCACGATCA CTGTTGTCTG ATTGTGCTTG GCTCGGAAGG TCGTGGAGAA
CAAATCCTCA AGACCGATCA AGATAATGCA CTGATCATCC AAGATGGGCT GGAATGGGAA
CACTGCGCCG AAGTGATGCA AACCCTCACA CACACCTTGC AGCAACTGGG TTACCCACTC
TGCCCTGGCA AAGTCATGGT TAACAATCCG AAGTGGGTTC GAACGCAGCA AGAATGGATT
AAAACGCTCG ATGGTTGGAT TGCTAAAGCA CAGCCTGAAC AAATCATGGA TTTAGCCATC
TTCAGTGATG CCCATGCGGT CGCAGGCAAT CGAGAGTTGC TCACGCCTAT CGCCGAGCAC
CTCAGAGATA GCATGAAAGA TCGTATGTTG ATTCTGTCCG ATTTCACTCG CCCTGCTCTG
CAATTTTCCG TGCCTCTTAC TCTGTTTGGT AAAGTAAAAA GTGCTAAAGA TGGGCTGGAT
ATAAAGCGCG GCGGCATCTT TCCAATCGTG CATGGCATTC GCACTTTGGC ATTGGAATAC
GCGATTGAAG AGAAGAACAC CTTCGAGCGT ATCGAAGCAC TGAGAAACAA ACGCATCTTA
GAACCAGAAA CCGCAGACAA CCTCAACGAA GCGCTGAAGC TGTTCCTCAA GATCCGCTTG
AACCAGCAAT TGAGTAAGCA GGAAGCACTG AACAACATCG ACATCAAACA GTTAGACCGA
ACAGAACGAG ACCTGCTGCG CCACAGCTTA CATGTGGTGA AGAAGTTTAA GCAGTTCTTA
GGCTTCCATT ATCAAATCCG TGATTAG
|
|---|
| Protein sequence | MPDKFNMQSP PFNRLTDAQQ NRLRSSLDVA YYRTRDVILA CGQDNPHLHV LIKGAVEERS
KDQDEVFAHY ANDDMFDVRS LFEESVRHQY VALEDTLSYL LPKGVFLELY NENGQFAAYF
DNNLSKRQAL IEAAQQQQNL AEFILTKVDS SIYHPPMLLA ADMPINQVTK TLKDNGIDAA
LVQLNQDDPR LEQHPSAHPY AIVTRTNMLH AVMLDDHPLD TPVSEIATFP VYHVDDDDFL
FNAMITMTRN RMKRLMVCEG NQAVGMLDMT QILSAFSTHS HVLTLSIARA SSVEELALAS
NRQRQLVDSL LTNGIRTRFI MELISAVNEQ IIEKAFELVV PPALHDHCCL IVLGSEGRGE
QILKTDQDNA LIIQDGLEWE HCAEVMQTLT HTLQQLGYPL CPGKVMVNNP KWVRTQQEWI
KTLDGWIAKA QPEQIMDLAI FSDAHAVAGN RELLTPIAEH LRDSMKDRML ILSDFTRPAL
QFSVPLTLFG KVKSAKDGLD IKRGGIFPIV HGIRTLALEY AIEEKNTFER IEALRNKRIL
EPETADNLNE ALKLFLKIRL NQQLSKQEAL NNIDIKQLDR TERDLLRHSL HVVKKFKQFL
GFHYQIRD
|
|---|
| |