| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004234 |
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| Symbol | |
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| ID | 8557995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2911797 |
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| End bp | 2913482 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407356 |
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| Product | trehalose-6-phosphate hydrolase |
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| Protein accession | YP_003286857 |
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| Protein GI | 262395003 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0161937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATGA CCAAGCATGA TGAGAGCTGG TGGAAAACCG CAACCATCTA TCAAATTTAC
CCAAAAAGCT TTTGTGACAG CGGCAGTAAA GGCACGGGCG ATATTAAAGG GATCATTTCT
AAACTGGATT ATCTAAAACA TCTCGGTGTG GATGCGATTT GGCTGACGCC AGTGTATCAG
TCTCCAATGG TTGATAACGG TTACGATATC TCCGATTACT ACGCGATCAA TCCAGAGTTC
GGCACTATGG AAGATTTCGA TACCCTGTTG GCAGAGGCTC ATCAGCTGGG CATTCGAATC
ATCGTGGACA TCGTGGTCAA CCATACTTCG ACAGAACACA AGTGGTTCCA ATCGGCGTTA
GGTGATAAAA ACAGCCCTTA CCGTGATTAC TACATCTGGA AAGATCCGGT TGATGGCGCA
GAGCCCAACA ACTGGCAATC GAAATTTGGA GGCAATGCTT GGGAATTGGA TGAAGCGACA
GGGCAGTACT ACTTGCACCT TTTTGCTAAA GAGCAGGCGG ATTTGAACTG GGAAAACCCA
GTGGTGCGCG AAGAAGTCAA AGAAGTCATC AGCTTCTGGG CAGACAAAGG CGTGGATGGT
TTCCGTCTTG ATGTCATCAA CCTGATTTCT AAACAACAAG ATTTCCCAAG CGATGATATT
GGCGATGGCC GTCGTTTCTA TACTGATGGT CCTCGCGTGC ACGAATATCT GCAAGAAATC
AGCGAAGCCG TGTTCCAAAA GTACGGCAGC GTCACGGTGG GGGAAATGTC TTCCACCACG
CTAGAGCACT GCCAGCAATA CTCTTCGCTA GCCGGCAAAG AGCTATCCAT GGTGTTCAAC
TTCCACCACC TGAAAGTGGA TTATCCGAAT GGTGAAAAAT GGACCAAAGC GCCGTTTGAT
TTCATTCAGT TAAAGCAGAT CTTCAACCAT TGGCAAACGG GCTTAAATGG CAAAGGGTGG
GGGGCGCTGT TCTGGTGTAA CCACGACCAA CCTCGTGTGG TCAGCCGCTT AGGCGATGAT
AAACAATACC GCGTCGAATC AGCCAAAATG TTGGCGGCGT CTGTACACAT GATGCAAGGC
ACACCTTATG TTTACCAAGG TGAAGAGATT GGTATGACCA ACCCAGGTTA CACTGAGATC
AGCCAGTACC GCGACGTAGA AAGCACCAAC ATGTACGACA TCATGGTCAA CCGTGATGGC
GTATCACACG AGGAGATGAT GGCGATTTTG GCGCAGAAGT CGCGTGATAA CTCACGTACG
CCAATGCAAT GGAACAGCCA AAAGCACGCT GGTTTTACCG AAGGCACACC GTGGCTTGAA
GTGGCGCAGA ACTACTCTGA AATCAACGCA GAAGCTGCGG TTGCTGATTT AAGCTCGGTG
TTCTATTTCT ACAAACGTTT GATTGAGCTA CGTAAACAGG TTTCGGTGAT CACTGATGGC
TGTTATGAAG ATTTATTGCC AGAGCATCAA CGCATTTTTG CTTACGCTCG CCAGAACGAC
AAACAAACGC TGCTGTGTAT CAATAACTAC TACGCTGAAG AGGTGGAATG CGTTCTGCCA
GAACGTTTTG ATATGAGTAA AGCGAAAAAC TTGCTATCTA ACTATCAAAA CTCAGCGAGT
GCAGTCGCGT CTAACCATCA AGTATTACGA CCTTACGAAA CTCGTATTTT ATTGATAGAA
GAATAA
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| Protein sequence | MAMTKHDESW WKTATIYQIY PKSFCDSGSK GTGDIKGIIS KLDYLKHLGV DAIWLTPVYQ
SPMVDNGYDI SDYYAINPEF GTMEDFDTLL AEAHQLGIRI IVDIVVNHTS TEHKWFQSAL
GDKNSPYRDY YIWKDPVDGA EPNNWQSKFG GNAWELDEAT GQYYLHLFAK EQADLNWENP
VVREEVKEVI SFWADKGVDG FRLDVINLIS KQQDFPSDDI GDGRRFYTDG PRVHEYLQEI
SEAVFQKYGS VTVGEMSSTT LEHCQQYSSL AGKELSMVFN FHHLKVDYPN GEKWTKAPFD
FIQLKQIFNH WQTGLNGKGW GALFWCNHDQ PRVVSRLGDD KQYRVESAKM LAASVHMMQG
TPYVYQGEEI GMTNPGYTEI SQYRDVESTN MYDIMVNRDG VSHEEMMAIL AQKSRDNSRT
PMQWNSQKHA GFTEGTPWLE VAQNYSEINA EAAVADLSSV FYFYKRLIEL RKQVSVITDG
CYEDLLPEHQ RIFAYARQND KQTLLCINNY YAEEVECVLP ERFDMSKAKN LLSNYQNSAS
AVASNHQVLR PYETRILLIE E
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