| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003802 |
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| Symbol | |
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| ID | 8557537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2429981 |
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| End bp | 2430673 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406899 |
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| Product | pseudouridylate synthase LSU rRNA-specific |
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| Protein accession | YP_003286427 |
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| Protein GI | 262394573 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGATA TTCTACATAC CCATCCCGAT TTTCTGATCA TCAATAAGCA TCCCAACGTC
TCTGTTCATA AAGACGATGG CGACACAATG CTGCTGCAAG AAGTGGCCAA GCAGAGTGGT
GATGAGCAGC TCTATCTTAT CCATCGCTTG GATAAAATGA CATCGGGTAT TCTGTTCCTC
GGACGCAACG CCAAAGCGGC CAGTGCGTTA TCGCAAGCCT TCGCTGACCG CCAAGTGGAA
AAGTTCTATC TGGCGATTGG CTCTAAAAAG CCGAAAAAGA AACAAGGTTT GGTCGTTGGT
GATATGGAGC GTTCGCGCCG TTCATCATGG AAGCTGGTCA ACAGCAAAAA TAACCCAGCC
GTTACCCAGT TTTTCTCTCT TGCGGCAGAG CCAGGAGAGC GCCTATTTTT ATGTAAGCCA
CACACTGGTA AAACGCATCA AATCCGCGTG GCATTAAAAT CGGTTGGCTC AGGTATTGTT
GGTGACCCGA TTTACAATGC AGGCAATGAG GCTGATCGCG GTTATCTGCA TGCATTTTCA
CTTTGCTTCC AATACCGAGA TGAGCAATAT CGCTTTGTTT GCGACCCACG AGAACACAAA
ATGCTTGGTA AAAAATGGCA CAGTGAGACC GTCTCTCAGG GTTTGGATAC TTGGCTTTCC
CCTTGGGAAC TGAACTGGCC TACGATCAAA TAA
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| Protein sequence | MFDILHTHPD FLIINKHPNV SVHKDDGDTM LLQEVAKQSG DEQLYLIHRL DKMTSGILFL
GRNAKAASAL SQAFADRQVE KFYLAIGSKK PKKKQGLVVG DMERSRRSSW KLVNSKNNPA
VTQFFSLAAE PGERLFLCKP HTGKTHQIRV ALKSVGSGIV GDPIYNAGNE ADRGYLHAFS
LCFQYRDEQY RFVCDPREHK MLGKKWHSET VSQGLDTWLS PWELNWPTIK
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