Gene VEA_003675 details

Gene Information

• Locus tag: VEA_003675
• ID: 8557410
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 2284574
• End bp: 2285248
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646406772
• Product: predicted regulator PutR for proline utilization GntR family
• Protein accession: YP_003286300
• Protein GI: 262394446
• COG category: [K] Transcription
• COG ID: [COG1802] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACAGA AACCTGTTTT TAAAACGCGC ACTCAGCTCG TTGAGGAAGC AATTCGAACT 
CAGATCTTGA AGGGCGAGTT AAAAACTGGT CAACCTTTAC GTCAAGATGC GTTAGCAAAA 
GAGTTTAATG TTAGCCGGAT TCCTGTGCGT GAAGCGTTAG TTCAATTGGA AGCACAAGGA 
CTCGTTAGCT TTGAACCTCA CAAAGGTGCG ACGGTCACTG AGCTATCTCC AGAGAAAATC 
AATGAGCTAT TTGAACTGCG CGCTGTCGTG GAATGCCACA TTTTAGAGCG TGCGATTCAA 
AATATGACAG ACGCTGACCT TGAACGCGCG CGAGAAGTTC GCGAACGTTT CGAGTCAGTA 
GTGAACAGTG GCGACGAAGT AGAAGAATGG AGCAACTACA ACTACGAGTT CCACAAAGCC 
CTATATGCGC CAGCCAACAT GCCTGAAACT ATGGACGTCA TTTACAACTT GAACACAAAG 
TGTGACCGAT ACATACGTAT GCAGCTATTG TTCACAACAG GCATTAAAAA GGCAGAAGAA 
GAGCACTTAA GCTTGTTTGA AATGTGCCAA AATCGCGATA TAGAAGGCGC CAAGTACCTG 
CTGAAAAAAC ACATTCTAGA AGCAGGCACA GCGATTCGAA ACCTGCTGCT TGAAAGGCAA 
AATATCAGCC AGTAA 

 

Protein sequence

MSQKPVFKTR TQLVEEAIRT QILKGELKTG QPLRQDALAK EFNVSRIPVR EALVQLEAQG 
LVSFEPHKGA TVTELSPEKI NELFELRAVV ECHILERAIQ NMTDADLERA REVRERFESV 
VNSGDEVEEW SNYNYEFHKA LYAPANMPET MDVIYNLNTK CDRYIRMQLL FTTGIKKAEE 
EHLSLFEMCQ NRDIEGAKYL LKKHILEAGT AIRNLLLERQ NISQ