| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003672 |
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| Symbol | |
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| ID | 8557407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2280500 |
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| End bp | 2281717 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406769 |
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| Product | D-amino acid dehydrogenase family protein in hydroxy-L-proline catabolic cluster |
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| Protein accession | YP_003286297 |
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| Protein GI | 262394443 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAGGTG CGGGGATTAT TGGCTTATCA ATTGGTTTGA AATTGCAGCA GCAAGGTTAT
CAAGTCACGA TTTTTGATCC CAATGGCGTG GGGAATGGAT GCTCTAAGGG AAATGCAGGT
CATATCGCGA CTGAGCAAAT CTTCCCTCTT GCAACGCCAG CGCTGCTTCC GCAATTACCT
AAAATGCTGC TAGATCCCAA AAGTCCGGTT TCGATCCGTT GGCAAGATAT TCCAAACACA
ATCGGGTGGA TGATTCGTTT TCTATTACAA ACAAAGCCAT CAGCTGCGGA GCGGGCAAAA
AACGCGATTA AGAGTCTTAA CGAGCGGTCA GTGGCAAGTT GGCGTGGCGT GCTTGATTCA
ATCGGAAAAG CACATCTAAT AAAAATGAAT GGTTCATTGC TCACTTTTGA AAACGAGAAA
CTGTTTCAGA ATTATCAAAG TACGCTTAAC TCACTGGCTA AAAACGGTGT GACGTATCAA
GTTTGGACAC AAGAGGAGAT TCGAGAGCGG ATACCTGATC TCAGCCATAA GGTTCGTGTC
GGAGTCTTTT TTCCCGAAAC AGGTAATACA CTAGACCCTT ATCAGCTCTG TGTTGAGCTA
AATGAAGCTT TTGAAGTTCT TGGCGGTAAG GTTTTACAAA AAGGTGTATC TGCGTTGGCG
AAAAATGGTG ATGTGTTGGT TGAGTCTCAA ACACATTCAT TTGACCGAAT CATTGTTGCC
GCTGGTGTAC ATTCTAAGCC TTTGATACGG CAACTAACCG GAGTCAAAGT GCCGATTCAA
GCCGAGCGCG GTTATCACCT AATGGTGGAT GACAAGCGTG ATGTATTGCC TTTTCCTATT
AGCTCTGCCG ATAGAAAATT CATCATGACT CCTATGTCAG GTGGGCTACG ATTGGCAGGC
ACTGTTGAGT ATGCCGATGT AGAGTCACCA CCCAATATGA AACGTTCAGA AATGCTTTTT
CAGTTAGGCG ATGAGATGTT TGAATCGGGG TTACATCCAC TCAAGCAAGG AGAAAAGTGG
ATGGGTAATC GGCCTTCAAC AGTCGACTCG TTACCGGTTA TTGATAGCAT TTGGGATGGA
AATGTATTAC TGGCATTTGG CCACCAACAC CTTGGATTAA CTCAAGCGGC GATTACGGCA
GATCTCCTTT TAGAGCTTAT CGAAGGAAAG CCGACATCGA TTGATCTTTC ACCTTTTTCA
TTACAACGAT TTGCCTGA
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| Protein sequence | MIGAGIIGLS IGLKLQQQGY QVTIFDPNGV GNGCSKGNAG HIATEQIFPL ATPALLPQLP
KMLLDPKSPV SIRWQDIPNT IGWMIRFLLQ TKPSAAERAK NAIKSLNERS VASWRGVLDS
IGKAHLIKMN GSLLTFENEK LFQNYQSTLN SLAKNGVTYQ VWTQEEIRER IPDLSHKVRV
GVFFPETGNT LDPYQLCVEL NEAFEVLGGK VLQKGVSALA KNGDVLVESQ THSFDRIIVA
AGVHSKPLIR QLTGVKVPIQ AERGYHLMVD DKRDVLPFPI SSADRKFIMT PMSGGLRLAG
TVEYADVESP PNMKRSEMLF QLGDEMFESG LHPLKQGEKW MGNRPSTVDS LPVIDSIWDG
NVLLAFGHQH LGLTQAAITA DLLLELIEGK PTSIDLSPFS LQRFA
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