| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003670 |
|---|
| Symbol | |
|---|
| ID | 8557405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2278241 |
|---|
| End bp | 2279215 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646406767 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_003286295 |
|---|
| Protein GI | 262394441 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCA TCGAAGCACA GCAAGTCGCG CAATGTTTAA CAATGAAGTC TCTTATTGAA
ACGATGCGTG AAATGTACTC GCGGCCAGCG ACAATACCTC AACGCCGAGT CATGCCCTTA
GAAGAGGGAG AATACGAGGC GTTTGCGCTA CTTCCAGCTT GGAACCAGGA GTTGATTGCG
GTGAAAGCCT TTACGTATTT CCCGCATAAT CCTGAGCAAG GCAAAGATAC GCTTGCATCT
AAGCTGCTTG TTTTCAGACG AAACGATGGT GAGCCGCTCG CACTCGTGGA CGGTAAAGTT
TTAACGTTTT GGCGCACCGC CGCAGCTTCT GCGTTGGCAG CGGACTATTT AGCGCGTCCC
GATGCTGATC GTCTGTTGAT CTGCGGAACG GGCAATCTTG CGCCTTATTT TGCGTGGGCA
TACGCTGCGG TTCGCCCACT TAAGCAGGTT TATATTTGGG GGCGTAACTC AGACAAAGCC
GAGGCGACGG TAGATGCCAT TGTGTCATCT TCAGAGTATC AGTCGCTTCC TGATGAGCGT
CGGTTTCGCG TTTCAGTCGT AGAAAAAGTG GACCACGTTA TCAAACACGT TGACATCATC
AGTTGTATTA CCGCATCAGC AGAGCCTTTG TTTAATGGCG CGGACGTGCA GCCGGGTACC
CATATTGATT TGGTCGGTAA TCATGACTTG GATAAGCGTG AATGCGACTC AGAAGCAGTG
CAACGAGCGC AGGTGTATGT CGATAGCCGC ATTAACGTAT TAGCCGAAGC GGGCGATCTT
CTCATTCCAA TTCAAGAGGG CGTATTCACG TCAGACGATA TCAAAGGGGA ATTACCGCAG
CTTTGCGCCC AACAAATCTC AGGACGTCAA AACGATGAGG TCATTACTTT ATACAAATCA
GTTGGCAGTG CTTTGGCTGA TTTGGCCGCT GTAAAGGCGG TGTTGTTAGA AAATGGCATA
GATAGCCATG CCTGA
|
|---|
| Protein sequence | MKVIEAQQVA QCLTMKSLIE TMREMYSRPA TIPQRRVMPL EEGEYEAFAL LPAWNQELIA
VKAFTYFPHN PEQGKDTLAS KLLVFRRNDG EPLALVDGKV LTFWRTAAAS ALAADYLARP
DADRLLICGT GNLAPYFAWA YAAVRPLKQV YIWGRNSDKA EATVDAIVSS SEYQSLPDER
RFRVSVVEKV DHVIKHVDII SCITASAEPL FNGADVQPGT HIDLVGNHDL DKRECDSEAV
QRAQVYVDSR INVLAEAGDL LIPIQEGVFT SDDIKGELPQ LCAQQISGRQ NDEVITLYKS
VGSALADLAA VKAVLLENGI DSHA
|
|---|
| |