| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003576 |
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| Symbol | |
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| ID | 8557309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2174664 |
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| End bp | 2175257 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646406671 |
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| Product | SM-20-related protein |
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| Protein accession | YP_003286201 |
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| Protein GI | 262394347 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3751] Predicted proline hydroxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGATG CGTTAGCAAC CAATGGCTAC TACATCTGGG ATGACTTTCT TTCTGAACAA
GAGGTGGCTC AACTGCGAGA TTGCATTCCA AGCAATTGGA AAAAAGCACG TATTGGTCGT
AACGATGATG TTACTCGTAT TGAATCTATT CGTAGTGACA AGATTCAATG GTTATCGCCA
AATATGGGGC ATGCTGTTAC TTCTTACTTG GATAAAATGG AAGAGATCCG CCAAGAAGTG
AACCGTCACT TGTTTCTTGG ACTTTTTGAG TACGAAGCTC ATTTTGCCAA GTACGAGAAA
GGGGACTTCT ACCAAAAACA TTTAGATTGC TTCAAAGGTA ACGAAAACCG TCGATTGACG
ACCGTTTTTT ATATGAACGA ATCCTGGACG GAAGAAGACG CGGGTGAATT AGTAGTATAC
GATTTGAATG ACAATAAAAT TGCAACCATT CCCCCACGCT CAGGGCGTTT GTTCGTATTC
TTATCAGAGC AGTTCCCACA TGAGGTGTTA CCAACCAATG CCGAGCGTTT TAGTATCGCT
GGTTGGTTCA GAATCAATGG TGTGCGAGAT AATTTACTTG ATATTGCTAG CTAA
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| Protein sequence | MIDALATNGY YIWDDFLSEQ EVAQLRDCIP SNWKKARIGR NDDVTRIESI RSDKIQWLSP
NMGHAVTSYL DKMEEIRQEV NRHLFLGLFE YEAHFAKYEK GDFYQKHLDC FKGNENRRLT
TVFYMNESWT EEDAGELVVY DLNDNKIATI PPRSGRLFVF LSEQFPHEVL PTNAERFSIA
GWFRINGVRD NLLDIAS
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