Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003562 |
Symbol | |
ID | 8557295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2155344 |
End bp | 2156714 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406657 |
Product | sodium/glutamate symporter |
Protein accession | YP_003286187 |
Protein GI | 262394333 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0786] Na+/glutamate symporter |
TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACGCAT TTACTGGAGG ACAAGAAATG CCAAAAGGTC TAATGCTGAC TGACTTAGCC ATCGCTGGCT TACTATTAAT TGCAGCAAAA GTAATTCGTG TACATATGCC TTTACTACAA CGCATGTACA TTCCATCTGC TGTATTGGCT GGGTTATTTG GTCTTATTTT TGGCCCAGCT CTGCTTAACG TATTACCTTG GACAGATACC TTTACCGCAA ACGCAAGCCT CTTAACTGCT GCACTTTTTT CTGCGTTGGG TTTAGCAACA GATGTCCCGT CACCAAAAGT GGTTGCTCAA CGAGCAGGCT CATTGTGGGC GTTTAACCAA ATTGCATCCG TGTCGCAATG GCTGTTTGCA GCAATGTTTG GTTTAGTACT TACCACCTTC TTTTGGCCTG ACATTAATCC TGGATTTGGC GTAACCATGT CCGCGGGATT CATGGGCGGA CATGGTTCAG CATCTGTAGT CGGTGAAATC TTCACGGGAC TTGGTTGGGA AGATGGTTTT ACACTTGGTT TAACGTTCGC CACGGTTGGG ATCTTTATTT CAATCTCGGT GGGCATGTTA ATGCTTCAGT TTGCGTTGAA AATGGGCTGG ATTCGTAGCT TTACGACATT CGACAGCATG GACGAACACG AACGCAAAGG CTTAGTGAAA CCTGACGATC AAGAACCTGT GATGAAAGAT ACGATGTCAT CATTGTCAGT CGATTCTTTC GCGATTCACG CGGCGCTGGT TGTAGTGGTA ACCGCTTTCT CTTATGTAGC AGCCAACTAC TTATCTTCTT TCCACGATAA GGTACAAATT CCGACTTTCG TTACTGGCTT TCTGGGCGGT ATGTTAGTTC GAATCATCGC TAAGCAAACC AAGGCATCTC ATTACCTATG TGACGGCGCA TTCAAACACG CAGCGGGTAT TAGTACGGAT TACCTGATCA TCTTTGGTAT CTCAGCGATT AAGATCACGG TTCTAGCGCA GTATTTAATG CCAATGGTAG TGCTCGCAAT TGGTGGTATC GCGTTCACGC TATGGCTTAT CTTTTGGGTT GCACCTCGCA TCATGGGAGA TGACTGGTTT GAGAAAGGCA TTTTCTCTTG GGGATGGTTA ACAGGTACAG TCGCTATGGG TATCGCGTTA TTACGCATTG TCGACCCCAA AATGCGCAGT AAAGTGTTAG ACGACTATGC TATCGCTTAT GTTCCAGGCT CAATTACGGA CATTTTCATC ATCTCGCTTA TGCCAATCGC AATGTATAAC GGCATGCACT GGCAAGCGTT AGGTGTTGGT CTAACCTATA TCGCCGTTGT CTTATTTATT TGGCGATTTG TGTTTAAGCG TAGCGGTCAA GCCGTCGCAA ATGAGTCTTA A
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Protein sequence | MNAFTGGQEM PKGLMLTDLA IAGLLLIAAK VIRVHMPLLQ RMYIPSAVLA GLFGLIFGPA LLNVLPWTDT FTANASLLTA ALFSALGLAT DVPSPKVVAQ RAGSLWAFNQ IASVSQWLFA AMFGLVLTTF FWPDINPGFG VTMSAGFMGG HGSASVVGEI FTGLGWEDGF TLGLTFATVG IFISISVGML MLQFALKMGW IRSFTTFDSM DEHERKGLVK PDDQEPVMKD TMSSLSVDSF AIHAALVVVV TAFSYVAANY LSSFHDKVQI PTFVTGFLGG MLVRIIAKQT KASHYLCDGA FKHAAGISTD YLIIFGISAI KITVLAQYLM PMVVLAIGGI AFTLWLIFWV APRIMGDDWF EKGIFSWGWL TGTVAMGIAL LRIVDPKMRS KVLDDYAIAY VPGSITDIFI ISLMPIAMYN GMHWQALGVG LTYIAVVLFI WRFVFKRSGQ AVANES
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