Gene VEA_003257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003257 
Symbol 
ID8556990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp1823982 
End bp1824617 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content41% 
IMG OID646406352 
Productthreonine efflux protein 
Protein accessionYP_003285882 
Protein GI262394028 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGAGC AATACTTATT TCTACTGCCA ATCGCTACGC TGTTACTCAT TGGCGCGATG 
ACACCAGGCC CTTCATTTAT CTTGGTTGCG CAAACAGCCA TATCAAAATC TAGATCTGAA 
GCCATGTGTA TTTCTATAGG TTTAGGTTTG GGGGCAAGTA CATTTGCATT TATTGCCTCA 
ATGGGGCTCA TTGCACTTTT TGACGCTGTG CCTGAGTTTT ACGTAGCATT CAAAATTCTT 
GGTGGTCTAT ATCTATGTTA TCTGGGGGTG AAAATGTGGC GTGCGAGCAA AAGCAAAGTT 
GTTTCTGCTG ACGCAGAGCT AACTAGCAAA CCAGCTCATT TTAAGGCGGT AGTCCTTGGC 
TTGGCGACAC AGTTAAGTAA TCCAAAGACT GCAATTGTAT TTAGCAGTGT GTTTGCAGCC 
ATGTTACCCG TGAAAGTTCC TGTTCATACA ACATCAATAT TAGTTGTTGG TGTGTTTGTC 
TTAAATTTTT CTTGGTACTT CCTAGTTTCT ATTTTGCTAT CAAGTCCAAA GGCTCAAGCC 
AGTTATTTAC GATTTAAATC CTACATCAAC AAAGGTTCAG GTGTATTAAT GGGGTCAATG 
GGTAGTAAGT TTGTTGCTGA GAGTTTCAAG CCCTAA
 
Protein sequence
MLEQYLFLLP IATLLLIGAM TPGPSFILVA QTAISKSRSE AMCISIGLGL GASTFAFIAS 
MGLIALFDAV PEFYVAFKIL GGLYLCYLGV KMWRASKSKV VSADAELTSK PAHFKAVVLG 
LATQLSNPKT AIVFSSVFAA MLPVKVPVHT TSILVVGVFV LNFSWYFLVS ILLSSPKAQA 
SYLRFKSYIN KGSGVLMGSM GSKFVAESFK P