Gene VEA_003137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003137 
Symbol 
ID8556870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp1708904 
End bp1709407 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content44% 
IMG OID646406232 
Producttranscriptional regulator MarR family 
Protein accessionYP_003285762 
Protein GI262393908 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0057882 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCCTA CAGACTGGAT GAATAAATTG GAAAAGTACG AAGAAGTATT GGTCTCGATT 
CGTCAGATCA TCCGCGCTAT TGATTTACAT TCTAAAAAGC TGAGCAAAGA GTCTGGATTG 
ACCGCTCCAC AGTTGATTTT GATGCGTGCT ATCAATGAGT TAGATAACGT AACGATTAAA 
CAGTTGTCTA GCCACACTAA CATGAGCCAA GCGACCGCAA CGACCATTCT AGATAGACTA 
GAACGAGGCC AGTTTGTTGA GCGTCAACGC AGTGTTCAAG ACAAGCGTAA AGTGCATGCT 
GTACTTACGA GCAAAGGCCA AGAAGCCCTA AAGCAAGCAC CAACGCCATT GCAGGAACAC 
TTCATTAATC GATTCCAAAA ACTGGAAGAA TGGGAGCAGT CTCTGCTGCT ATCTTCCGTT 
CAACGCATCT CAACAATGAT GAATGCAGAG GATATCGATG TCGCTCCAAT GCTAGAGCTT 
GGCAGCATTA CAAAAGTCGA TTAA
 
Protein sequence
MFPTDWMNKL EKYEEVLVSI RQIIRAIDLH SKKLSKESGL TAPQLILMRA INELDNVTIK 
QLSSHTNMSQ ATATTILDRL ERGQFVERQR SVQDKRKVHA VLTSKGQEAL KQAPTPLQEH 
FINRFQKLEE WEQSLLLSSV QRISTMMNAE DIDVAPMLEL GSITKVD