| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002974 |
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| Symbol | |
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| ID | 8556704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1517359 |
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| End bp | 1518834 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646406067 |
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| Product | GGDEF family protein |
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| Protein accession | YP_003285601 |
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| Protein GI | 262393747 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.337461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAACC AAAGGCGATT TAGTCTCTCA TTTGTCATCT TTTTTCCCCT CGCATTATTT
GTCGTGGTTT TGCTTGTTAC GACAAAAAAC TACTACGATG CGGTCAATCG CTATATTGAT
TCTGAGTATG CACGTATTGA TCGTGCCATG TCCCGTGGTA TTAAAGTCCT CACCGCCTTA
GATTATAGTT TTACTAACTA TACGAATTAC GCTAACCCAT TGTCTGAAGA GCACAATTCT
TTAGTCAAAA AGGGGCTTTG TTATATTTGG CCGATAGACG TCTTGTTGCT GGAGAGTGTC
TACAGTGAGG GGTTACCTGC GGTTGATCTT GATTACATGA TTGTGGGCGA TGAAAGCTTA
TGTCAGCAAG GTTCAACGAT TAACCAATTA GCTGAACAAA AGGCGGGTTT TGCACCGTCA
TTGTCTTTTC TGCACGATAT TGAATCCCAT ATCGTTGGTA TTCATTACAT CGATAAACGT
GGTTACGTCA TTTCGTCTCC TGACACGTAC GCGAAAAACT TCACTAGAGA GCTTTGGTCA
ACGCTAAAAG CGCGCCCATT TTGGCAAAAA ACCGCACAAG ATAAAGTGAA CATCACCTTG
GCCGGACCTG GGCCGATGTT GGATTCGATG GAAGGCCAAA TCATTAGTAT GACGGTGCCT
GTTTACGAAA AAGGGAGGCA TCAAGGTGTG CTGTCCATTG ATTTTGATGT CAATGCGTTG
ATGGCTTCGT CACTAGGTCT TGTTGGTAAG TTTCATTTGG TTTCCAATTT ACAATCCATT
CCTCCAAACA GTACACGTAT CAAACCAGTC GAGTTAGATC GATTGAGTGC GAATCACAGT
ATGTATTACG AGTACAACCT TTGGGATGAA GCTAAGAACC TAGCGGTTTT CGAAAAATAC
AGCCTTATTG TTGCGATCTC TATTTACGTT TTGAGCACAG TCGTATTGTT CTATGTGAAT
ATGCATAGTG AGCGACGTTA TTTTAAAGAT CTCGCCGCCA GAGATCCGAT GACGAGCTTG
TTGAACCGTC GAGGAATGCA AACCGTGTGG CGCAATAAGA TGACGAAAAA ACAGGTTGCA
TTAGCAGTGT TCGATATTGA TAACTTCAAG AAGATCAATG ATACCTATGG TCATGATGTA
GGCGACTCTG CGATTCAGCT AGTTGCAAAA TGTATACGTG AAAATATTCG CCACACCGAT
GTCGCCTCAA GATTTGGTGG CGAAGAGTTC GTGTTGGCGA TTTACGATGA AGACTCGGAA
GGCATTAAGC TGATTCTAGA GCGGGTAAAA AAAGCCATAG ACGAACGCTC GACACGCGTG
ACTAAAGAAG GTTTTACGAT CTCTGGCGGT GTGGTGTTCA GTAAAGAGAA CCGAGTGGAA
AGCTTTGATG AGTTATTTAA AGCGGCAGAT GAAAAGTTAT ATCAAGCCAA GAGTACAGGC
AAAAATAAGA TTTGCTACGA AGAACTAAGC GCTTAA
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| Protein sequence | MVNQRRFSLS FVIFFPLALF VVVLLVTTKN YYDAVNRYID SEYARIDRAM SRGIKVLTAL
DYSFTNYTNY ANPLSEEHNS LVKKGLCYIW PIDVLLLESV YSEGLPAVDL DYMIVGDESL
CQQGSTINQL AEQKAGFAPS LSFLHDIESH IVGIHYIDKR GYVISSPDTY AKNFTRELWS
TLKARPFWQK TAQDKVNITL AGPGPMLDSM EGQIISMTVP VYEKGRHQGV LSIDFDVNAL
MASSLGLVGK FHLVSNLQSI PPNSTRIKPV ELDRLSANHS MYYEYNLWDE AKNLAVFEKY
SLIVAISIYV LSTVVLFYVN MHSERRYFKD LAARDPMTSL LNRRGMQTVW RNKMTKKQVA
LAVFDIDNFK KINDTYGHDV GDSAIQLVAK CIRENIRHTD VASRFGGEEF VLAIYDEDSE
GIKLILERVK KAIDERSTRV TKEGFTISGG VVFSKENRVE SFDELFKAAD EKLYQAKSTG
KNKICYEELS A
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