Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002568 |
Symbol | |
ID | 8556294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1059339 |
End bp | 1061711 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405657 |
Product | multimodular transpeptidase-transglycosylase |
Protein accession | YP_003285195 |
Protein GI | 262393341 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAACA GCAAGAAGCC TAGCGCGAAA AAAGCGCCAG CGAAGAAAAG TACAACCAAT AAAGGAACGA CAAAACCGAC TCGACGCACA CCGAGTAAAA AGCCGGCTAA CGAGAAACGT TCGTGGCTGA AAGTTTTGTG GTCATTTAGC TGGAAAGCCG GTGTTGCGCT TGCCGCTGTT TTGCTGTTTG TAGGTATTTA TTTAGACAGT GTCGTGAAAG AGCGCTTTGA AGGTCAGCTG TTTGAACTGC CAACGGTGGT TTATGCTCGC ATCTTGAACT TAAATCCGGG TGAAAATATC ACCATTCAAG AACTTCGTAA CGAGCTGGAT GTACTGAATT ACCGTAAGGT AAGTCAGCCT CGCTATCCTG GTGAGTACTC ATCTTCTTAC ACTCGTATTG AGCTGATCCG TCGTCCATTT GAATTTGCCG ATGGTCCTGA ACCGGATCGT CACGTGATGC TCCATTTTTC AGATTCTGGC TTACAGCGTA TTCAGTCTTT AGAGTCCCGA GGTGATCTTG GTTACTTACG CTTAGAGCCT AAGATGTTGG GTATGCTGGA GAAAGATCAA GATGAGCAGC GTCTGTTCTT GCGTCGTGAT CAGTTCCCAG AAATTTTAGT TGATGCACTG CTTGCGACCG AAGACCGGGA TTTTTATCAA CACGATGGGG TGTCTCCACT CGCGATTGCA CGAGCAATGG TTGCAAACAT TAAAGCGGGT CGTACTGTTC AAGGCGGTAG TACGCTAACT CAGCAGTTGG CGAAAAACCT GTTTTTGACC CGTGATAAGA CGCTGTGGCG CAAAGTTAGA GAAGCGTATA TTGCGTTAAT TTTGGATTAC CGTTACAGCA AAGATCGTAT TTTGGAAGCC TACCTTAACG AAGTGTATCT AGGGCAAAGT GGTGGTGAAG CGATCCACGG GTTTGGCTTG GCATCGCGTT ATTACTTTGG ACAACCGATC CAAGAGCTGC GAATCGATCA ACTGGCGATG TTAGTTGGGA TGGTAAAAGG ACCGTCTTAC TACAACCCAA TTCGTTACCC CGAGCGCACG AAAGAGCGCC GCGATCTTGT ATTACGTTTG TTGATGCAGC AAAACATGCT GACTTCAGAG CAGTATGAGC AAGCCGTCAG TCGTTCGCTT GATACGCAGA GCAAACCACG TATCGCGAGC CGTCAGCCCG CTTATTTCCA GCAATTGAGC ATTGAATTGA AAGAAAAAGT GGGGGAGCGA TTTAAAGCGG AAACCGGGCT GCGCGTGTTT ACGTCTCTGG ATCCGGTATC GCAAAGCAAA ATGGAGCAAG CCATCGCGAA AAAGATCCCG GAGCTAGCTA AACGAGGCGG TAAAGAATTG GAAGCTGCCG CTGTTGCGGT TGATCGTCAT AGTGGTGAAA TCCGTGCCAT GGTTGGCGGT AAACGTGTTG GTTATGAAGG TTTTAACCGC GCGCTCAATG CCAGTCGTCC AATTGGTTCT CTAGTTAAAC CAGCGATTTA CTTGACGGCT TTAGAACAAC CGGAAAAATA TAACCTAGGC ACGACGCTGC ACGACACGCC GCTAAGCCTG AAAAGCAGTA AAGGTAATGT ATGGACACCG CGTAACTACG ACCGAAAATA CCGTGGTGAT GTGCCACTCT ACATTGCTTT AGCGAAGTCA CTCAACGTGC CAACGGTGCG CTTAGGCATG GCGCTTGGTA TCCCAGAAGT ATCCGATACT TTAGAGCGTT TGGGCGTCAA CAAAGACGAA ATCCGCCCAG TGCCTTCGAT GTTTTTGGGC TCGTTTTCTT TGACGCCGTT TGAAGTCGCG CAGATGTATC AGACACTGAC GAACTCAGGC AAACGTGCGA AACTGACCGC TCTGCGTTCA GTGATGGATA TGGAAGGTAA TGTGCTTTAT CAATCCTTGC CTCGTTCATC AAGAGCCGTG GATGAGCAAG CAGCATGGCT AACGACCTAC GCGATGAAAC AGGGGGTTGC TCAAGGTACA GGCCGCTTCT TACAAAGCCA GTTTGGTTGG GCTGCACTGG CAGGAAAAAC GGGTACCAGT AACGATAACC GCGATAGCTG GTTTGTCGGT GTTGATGGCC GTGAAGTGAC GACAATTTGG CTAGGTCGCG ACGATAACAA ACCGGTTCAT CTAACGGGAT CGAGCGGTGC ATTACGAGTG TACGCAGAGT ATTTGAAGCA ACGCATTCCT GAGCGTTTAG AGCTTCCATG GCCAAGAGAG ATCACCACGT TAGGATTTAA GCCGACATCA GATGGTGGTT TAGAAATGAA CTGTCGTAGT GATTATAAAC TGCCAGTTTG GGATAAAACG GGTCAAATAA AGCAGCAGTG TGAGAAGAAA TCAAACTGGC TTAACAGCTT ATTTGATTGG TAG
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Protein sequence | MTNSKKPSAK KAPAKKSTTN KGTTKPTRRT PSKKPANEKR SWLKVLWSFS WKAGVALAAV LLFVGIYLDS VVKERFEGQL FELPTVVYAR ILNLNPGENI TIQELRNELD VLNYRKVSQP RYPGEYSSSY TRIELIRRPF EFADGPEPDR HVMLHFSDSG LQRIQSLESR GDLGYLRLEP KMLGMLEKDQ DEQRLFLRRD QFPEILVDAL LATEDRDFYQ HDGVSPLAIA RAMVANIKAG RTVQGGSTLT QQLAKNLFLT RDKTLWRKVR EAYIALILDY RYSKDRILEA YLNEVYLGQS GGEAIHGFGL ASRYYFGQPI QELRIDQLAM LVGMVKGPSY YNPIRYPERT KERRDLVLRL LMQQNMLTSE QYEQAVSRSL DTQSKPRIAS RQPAYFQQLS IELKEKVGER FKAETGLRVF TSLDPVSQSK MEQAIAKKIP ELAKRGGKEL EAAAVAVDRH SGEIRAMVGG KRVGYEGFNR ALNASRPIGS LVKPAIYLTA LEQPEKYNLG TTLHDTPLSL KSSKGNVWTP RNYDRKYRGD VPLYIALAKS LNVPTVRLGM ALGIPEVSDT LERLGVNKDE IRPVPSMFLG SFSLTPFEVA QMYQTLTNSG KRAKLTALRS VMDMEGNVLY QSLPRSSRAV DEQAAWLTTY AMKQGVAQGT GRFLQSQFGW AALAGKTGTS NDNRDSWFVG VDGREVTTIW LGRDDNKPVH LTGSSGALRV YAEYLKQRIP ERLELPWPRE ITTLGFKPTS DGGLEMNCRS DYKLPVWDKT GQIKQQCEKK SNWLNSLFDW
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