Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002273 |
Symbol | |
ID | 8555958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 725431 |
End bp | 728385 |
Gene Length | 2955 bp |
Protein Length | 984 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646405322 |
Product | predicted extracellular nuclease |
Protein accession | YP_003284901 |
Protein GI | 262393047 |
COG category | [R] General function prediction only |
COG ID | [COG2374] Predicted extracellular nuclease |
TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACACGT TAATCAAACC CTCAATACTC GCACTAACCA TCGCCAGTGC ACTTAGCGCA AACGCGAACG CAGAGATTAT TATTTCCCAG TATGTGGAAG GCGGCGCTTA TAATAAAGCG GTCGAGATCG CCAATACAGG TGATACTGCG GTGACACTCA CAGGCTATGA ATTAGCAAAA TCTTCGAATG GTGGCGGCTC GTGGGGCAGC ACTCTTGATC TTAGTGACGT AACGTTACAA GCGAAGCAAG TGTATGTGCT TGCTCATGGC GATGCGAGCG AAGCAATAAA GGCGGTTGCG GATTACACTG ATAAAAATGT AGCGAACTTT AACGGCGACG ATCCGTTGGC ACTTCTTAAA GATGGGGAAG TGCACGATAT ATTAGGTGTG ATGGGGGACG TGGATTTCGC TAAAGACACC ACGTTAGTTC GTAACAGTGA TGCGCTTACA CCTTCAACTA CCTACCAATC CACTCAGTGG ACAGCCTTAC CTAAAGATAA TATTGATGGT TTAGGGGAAT TAAATACAAC TGAGCCACCT GCGCCATTTG CTTGTGAAGT AGATGGACAA GAACCAGCCT TTACCACCAT CCAAGAGATT CAAGGTGAAG GTGCTTCTTC TCCATTTATT GATGGTTACC CTTACATCAC GACCGAAGAT CACTTCGTAA CTGGTGTGGT CAGTGCGGTA ACAACAGGCT TAACTAAAGG CTTCTACCTG CAAGCACTTG AGAATGATGG CAACGACAAG ACATCTGAAG GTTTGTTTAT TCACACCGAT GTTGCAGATA CAGAGCTGAA AGCTGGTGAT GTTGTTTGTG TGAAAGGGAA AGTACAAGAG TACTACAGCA ACACTCAGCT TTCTTCTGAT GCAAACAGTT ATGTAAAAAC AGGCACATCA AACGCCTCTT TGGTTACTCC GTTAACGATT AAGGAAGGGG AAACACTACG TGATGCACTA GAGCGTCATG AAGGTATGCA AGTTGAGCTC AGCTCGGCTA GCGAACTTTT CGTTACTCGT AACTTTTCTT ACGATTATGA CTCTCGACGC AACAACATGA TGTTGTCTCA TGAAGCACCG TTGTTTAAGC CGACTCAATT GCATGCAGCA GAGAGTGACG CTGCGGTTGC CCTTGCCAAA GAGAATGCGG CCAACCGTAT TTACTTGGAA TCGGATAGCA AAGCGCCAAA TGGTCAAATC CCATATTTCC CAACGTTTGC ACAAGACCTT GACCAAAATG GCTCTTCAGA GCAGCACATT CGCCTAGGCT CTCGTGTCGA AGGCCTGCAA GGTGTGGTGA ATTACAGCTA CAACGAGTAC CGCCTAATTG CGACCAATGA AGTCGATAGC AGCAACTTTG TCACGTCAGG TGATGACTTT GACGTTGCGC GTAAAGCGGC GCCAGCCATA GCCGATTCTG ATTTACGAGT AGCGAGCTTC AACGTTCTTA ACTACTTCAC TTCGGTTGCT GACAGCGGGC ACGACAACCC AACCGGGCAA AATCGTGGCG CAACAAACCT TGATGAGTTC TTGATCCAGC AAGCGAAAAT CGTTTCAGCG ATGAATAAGA TGGACGCGGA CATCATTGGC TTGATGGAAG TGGAAAACAA CGGCTTTGGT GATGGTAGTG CTATCCAAAA CTTGGTTGAT GCTTTAAACG CTGAGATTGA TGACGTGGAA GATCATTACA CGTATGTCGA AATCGAAGAG CAAGATAAAT ACCAAGAGGA ATACTTTGGC AGTGATGCGA TCATGGTGGC GATCTTATAT CGTGCTAACG CAGTAACACC AAAAGAAGCA GCAAAAGTCA TTGTGACGCC AGAGCAACAT ATTGCAGAGA ACACCATTAC TCGTAAAGAG GGCACTGAAA GTAACCCTGC ATACGACAAA TATCAACGCC ATAGCTTATT ACAGACCTTT ACAGTGAAAG AGACTGGCGA AGATCTTTCA GTGGTCGTGA ACCACTTTAA ATCGAAAGGT TCTGAATGTA TTGAAGAGTG GATTGCTGGT GTAGAAGACT CAGAACCCGC GGATCTGCAA GGTAACTGCA ACAACTTCCG TGTTTCTGCT GCGAAAGTCG TTGGTGAAGC GCTGAAAGAT ATTGATGGCG ATGTGCTCGT TATGGGCGAT TTGAACGCTT ACGGCAAAGA AGATCCGTTA CTGACCCTCA CTGATTACTC ACAAGAGAAA TACGGCCGTG ATATCTACAC TGCCGCTTAC ACAACCATTG GTGGCGGTGA GCTTCAAGTA GAGAAAACCA AGATTGAAAA AGGCTACGGT CTGCACAATT TAAACACCTT GCTGCATGGC GCTGATACGT TCTCGTACAC CTATTCAGGT GAGTTGGGGA ACTTGGACCA TGCATTGGCA AGCAGCAGTT TAGCGCAAAA AGTGGTGGCG ATTGAAGATT GGCACATCAA CTCACTAGAA AGTAACTTGT TTGAATACAG CAGCAAATAC ACGGGTGACA TGCCGAAGTA CAAAGATGCG TTCTCAGCGT CTGATCATGA TCCAGTGATT ATTGCTATTG ATTTGCCAGA TGATGATATC GATTTACCGA AAGCGGGTGA AAACTTAGCT ATTGATGTAC GTCTACCACC AACTGCGGTT GCGGGCGATA TTGTGACAGT GAACTTAACA GCATCTACGC AAGCGGCCGC GACAAGCAGT GATGCAAAAG TTTACTCGGC TAGCCAAACC TTGACTCAAA CTGACATTGA CGCACGCAGC GTGAATATTG AGTTTGAACA AGCGCCAGAA CAAGGTAATT ACCAGTTAGA AGAGAAAGTG ACAGACTCGA CAGGCAACGT CGTTAAGTTT AGCTCTGTTC GTGATGTCTC AATGACGCAA ACTGAAACGG GTGCAGAAGG TTCGAAGGAC TCAGATGGTG GTTCGTTTGG TTTTGGCGCG CTACTCGCGA TGCTTGGACT TGGCTTAGTA CGTCGCCGCA ACTAA
|
Protein sequence | MDTLIKPSIL ALTIASALSA NANAEIIISQ YVEGGAYNKA VEIANTGDTA VTLTGYELAK SSNGGGSWGS TLDLSDVTLQ AKQVYVLAHG DASEAIKAVA DYTDKNVANF NGDDPLALLK DGEVHDILGV MGDVDFAKDT TLVRNSDALT PSTTYQSTQW TALPKDNIDG LGELNTTEPP APFACEVDGQ EPAFTTIQEI QGEGASSPFI DGYPYITTED HFVTGVVSAV TTGLTKGFYL QALENDGNDK TSEGLFIHTD VADTELKAGD VVCVKGKVQE YYSNTQLSSD ANSYVKTGTS NASLVTPLTI KEGETLRDAL ERHEGMQVEL SSASELFVTR NFSYDYDSRR NNMMLSHEAP LFKPTQLHAA ESDAAVALAK ENAANRIYLE SDSKAPNGQI PYFPTFAQDL DQNGSSEQHI RLGSRVEGLQ GVVNYSYNEY RLIATNEVDS SNFVTSGDDF DVARKAAPAI ADSDLRVASF NVLNYFTSVA DSGHDNPTGQ NRGATNLDEF LIQQAKIVSA MNKMDADIIG LMEVENNGFG DGSAIQNLVD ALNAEIDDVE DHYTYVEIEE QDKYQEEYFG SDAIMVAILY RANAVTPKEA AKVIVTPEQH IAENTITRKE GTESNPAYDK YQRHSLLQTF TVKETGEDLS VVVNHFKSKG SECIEEWIAG VEDSEPADLQ GNCNNFRVSA AKVVGEALKD IDGDVLVMGD LNAYGKEDPL LTLTDYSQEK YGRDIYTAAY TTIGGGELQV EKTKIEKGYG LHNLNTLLHG ADTFSYTYSG ELGNLDHALA SSSLAQKVVA IEDWHINSLE SNLFEYSSKY TGDMPKYKDA FSASDHDPVI IAIDLPDDDI DLPKAGENLA IDVRLPPTAV AGDIVTVNLT ASTQAAATSS DAKVYSASQT LTQTDIDARS VNIEFEQAPE QGNYQLEEKV TDSTGNVVKF SSVRDVSMTQ TETGAEGSKD SDGGSFGFGA LLAMLGLGLV RRRN
|
| |