Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002120 |
Symbol | |
ID | 8555775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 542108 |
End bp | 542932 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646405139 |
Product | hydrolase (HAD superfamily) |
Protein accession | YP_003284748 |
Protein GI | 262392894 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAT CGCTACCTTG CAAAGAGATC ACTAAAATCG TTGCCTCTGA TCTGGATGGC ACGTTACTCG CACCAAACCA TCAGCTCAGT GCTTACTCAA AAGAGACGCT AAAAGCGCTG CATGAAAAGG GTTACACCTT TGTCTTTGCA ACAGGCCGTC ACCACGTAGA CGTTGCGAGC ATCCGTCGTC AGGTCGGTAT TCCGGCTTAC ATGATCACCT CGAACGGTGC CCGTGTGCAT GACCAGGAAG ATCAGCTGAT GTACAGCGAG AATGTCCCTG CAGAACTGGT TCAAGGCGTG ATCGACACGA TCAAGCACGA TCAAGAAATA CTTATCCACA TGTATCAAAA TGACAGTTGG TTGATGAACA AAGACGACGA AACATTGCGT GATTTCCATG ACGAATTCAC ATACGTCTTA TTCGATGAAG ACCAAGCGCC AACTGACGGT ATTGCGAAAA TCTTCTTCAC CCACCCAGCA CAAGACCACG AACGCTTGGT GGTGTTTGAA AACAAACTAC GTGAACAATT TGGCGATAAG CTGAATATTG CGTTTTCAAC ACCATGGTGC TTGGAAGTAA TGAGTGCAGG TGTGTCTAAA GGCCATGCCC TTGAAGCGGT AGCGAAAAAA CTCGGCCTCA CGTTAGAAAA TTGCGTGGCA TTTGGTGATG GCATGAATGA CGTAGAAATG CTGTCGATGG CAGGTAAAGG ATTGGTCATG GGTACATCAC ACGAGAAAGT GATGAAAGCA TTGCCAAATA ACGAAGTGAT TGGCAGCAAT GCAGAAGATG CGGTTGCACA CTACCTACAA GATCACTTGC TGTAA
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Protein sequence | MSTSLPCKEI TKIVASDLDG TLLAPNHQLS AYSKETLKAL HEKGYTFVFA TGRHHVDVAS IRRQVGIPAY MITSNGARVH DQEDQLMYSE NVPAELVQGV IDTIKHDQEI LIHMYQNDSW LMNKDDETLR DFHDEFTYVL FDEDQAPTDG IAKIFFTHPA QDHERLVVFE NKLREQFGDK LNIAFSTPWC LEVMSAGVSK GHALEAVAKK LGLTLENCVA FGDGMNDVEM LSMAGKGLVM GTSHEKVMKA LPNNEVIGSN AEDAVAHYLQ DHLL
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