Gene VEA_001887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001887 
Symbol 
ID8555516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp276610 
End bp276945 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content49% 
IMG OID646404880 
Productgeneral secretion pathway protein I 
Protein accessionYP_003284515 
Protein GI262392661 
COG category 
COG ID 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTGC TGGAAGTATT GGTCGCACTG GCTATTTTCG CCACCGCTGC CATCAGCGTC 
ATTCGCTCGG TGAGCCAGCA TATTAATACG ATCAGTTATT TAGAAGAAAA AATGTTTGCA
GCCATGGTTG TGGATAATCA GATGGCCAAC GTGATGTTGA GTACCAGTGA ACTTAAAGTA
AAGAACGGCA CAGAAGAGCT GGCTGGGCGC ACTTGGTACT GGAAAATCAC GCCTGTTGCC
ACCACGCAGC CATTGCTGAA AGCATTTGAT GTGAGTGTCG CGGTAGAGAA AAACGCGAGC
CCAGTCGTGA CGGTGCGAAG TTATGTGGCG CAATAA
 
Protein sequence
MTLLEVLVAL AIFATAAISV IRSVSQHINT ISYLEEKMFA AMVVDNQMAN VMLSTSELKV 
KNGTEELAGR TWYWKITPVA TTQPLLKAFD VSVAVEKNAS PVVTVRSYVA Q