Gene VEA_001239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001239 
Symbol 
ID8559551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1403697 
End bp1404878 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content45% 
IMG OID646408908 
Productpermease 
Protein accessionYP_003288387 
Protein GI262396534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.44328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACCT CATCGCAAGG CTGGAGAACG CCGCAAAATT TCCTCCTGTT AATTTCCATT 
ATCGTGCCCA TTGCTTTTTC TACCTGGATG GCGTTGTTGA ACAACTTCGT TATCGAGAAA
GCGAACTTTG ATGGCGCTGA TATCGGTTTA CTTCAAAGTG TTAGAGAAGT ACCTGGCTTT
CTCGCTTTCA CCGCGGTATT CGTTTTACTT TTTATCCGTG AACAACGCTT TATGCTCGTC
TCTTTGGCGA TGCTTACGCT TGGTACGGCA TTAACTGGTT ATTTTCCCAC TTTATACGGT
CTACTTTTTA CCACCTTGTT AATGTCCACC GGTTTCCACT ACTTTGAAAC ACTAAAGCAG
TCTTTGTCTT TACAATGGCT ATCGAAAGAA GAAGCCCCGG AAATGCTGGG TAAATTTATT
TCTGTTGGGG CTTTGGCTTC TCTGTTTACC TACGGCGCCA TTTGGGTTTC GCTCGAACAG
CTCAAACTTG ATTTTAAAAC GGTCTATCTA ATGGCAGGTG GTTTAGGTTT TGTGCTTATT
TTGGTGATGG CATTTGCTTT CCCTCAATTT AAAACAAAAG TGCCTCAAAA CAAGAAACTC
ATTCTGCGTA AACGTTACTG GTTGTACTAC GCGCTCACGT TTATGAGTGG TGCTCGCCGT
CAGATTTTCA CTGTTTTCGC TGGCTTCTTG ATGGTAGAGA AGTTTGGCTA CTCTGCCGCA
GACATTACCT TGCTGTTTTT GATCAACTAT GTCTTTAACT TCTTGTTTGC GAAGCGAATC
GGCCGCTTCA TCGGCGTTGT TGGTGAGCGT AAAGCGCTGA TGTTTGAGTA CGTCGGTTTG
ATCTTCGTAT TCGTCGGTTA TGGTTTGGTG CAAACCGCGG AGTGGGCTGC TGCATTGTAT
GTTGTCGATC ATTTGTTCTT CGCGCTAGCG CTTGCTATCA AAACCTACTT CCAAAAAATT
GCCGATCCTG CCGATATGGC GTCGACCGCT GGGGTTGCGT TTACTATTAA CCATATTGCG
GCGGTTGTGA TACCTGTTAC GTTTGGTGTG ATTTGGCTGG TTTCTCCTGC TAGTGTATTT
TACATCGGTG CAGGTATGGC GGCTGTGAGC TTACTGCTGT CACTTAATAT TCCAGCGAAG
CCAGAAGAGG GCAATGAGAC CCGATTATTA AAGTGGAGCT AA
 
Protein sequence
MTTSSQGWRT PQNFLLLISI IVPIAFSTWM ALLNNFVIEK ANFDGADIGL LQSVREVPGF 
LAFTAVFVLL FIREQRFMLV SLAMLTLGTA LTGYFPTLYG LLFTTLLMST GFHYFETLKQ
SLSLQWLSKE EAPEMLGKFI SVGALASLFT YGAIWVSLEQ LKLDFKTVYL MAGGLGFVLI
LVMAFAFPQF KTKVPQNKKL ILRKRYWLYY ALTFMSGARR QIFTVFAGFL MVEKFGYSAA
DITLLFLINY VFNFLFAKRI GRFIGVVGER KALMFEYVGL IFVFVGYGLV QTAEWAAALY
VVDHLFFALA LAIKTYFQKI ADPADMASTA GVAFTINHIA AVVIPVTFGV IWLVSPASVF
YIGAGMAAVS LLLSLNIPAK PEEGNETRLL KWS