| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001028 |
|---|
| Symbol | |
|---|
| ID | 8559341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1167781 |
|---|
| End bp | 1168782 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646408699 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003288178 |
|---|
| Protein GI | 262396325 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4874] Uncharacterized protein conserved in bacteria containing a pentein-type domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATTAC ACGAATCAGT GACCCAATTT GCTAATGGGA AAGAAGAAAG CACGCAAAGT
GCTCAGCGCC AAACCGCAAA CTGCGTAGTG ATGGTGCCAC CGAAAGAGTT TCGTTTTAAT
GAAGAAACCG CACAAGATAA TGAGTTCCAA CATAAAGTGG CACTCAGCCA AGAAGAAGTC
TCGCGTAGAG TGATGGCCGA GTTCGCGAGT ATGGTAGCTA CGCTGCGTCA AGAGGGCGTT
CAAGTTGTTG AGTTTGATTA TCCAGCTTCA GATGTTTCGA CGCCAGACGC GGTATTTCCA
AACAACTGGT TTAGCACTAC GCCAGATGGC ACGTTGTACA CCTTTCCAAT GGCCTGTGAA
AACCGTCAAA AAGAAGTGCG TCCCGATGCG CTTGTGGCGG CACTAGCGCA AGCTGGACGA
GAAGTTCATC GACGTAGCAG CCTAACTGAA TATCTTGATG AGCAAGCGTA TTTAGAAAGC
ACGGGTGTGA TGGTCTTTGA CCACTTAAAT AAAACGGTCT ATGCCGCACT CTCACAACGT
TGTGATCGTC TGGTTTTAGA AGATTACGCC GATCGTATTG GCTATGAACG AGTGATCTCA
TTCCAAACTC GTTTGCCATC TGGTGCGCCT ATTTACCATA CCAACGTGAT GATGGCTGTG
GGTGAGCAGT TCTGCGTGAT TTGTGACGAA GTGATCCCAG AATTTGAGCG TCGTTTTGTG
ATGAAATCAC TCGCCAAAGA TAAGCAAGTG ATCTCTATTT CGATTGAGCA AATGAACCAC
TTCTGCGGCA ACATTCTTCA GTTGGAAACC ATCAATGGAG ACAAAGTCAT TGCGATGTCG
CAATCGGCAT TCGATGCTTT CTCTCCTGCA CAAAGAAATC AACTTGCGAC GCACGGTAAA
TTGCTGCCAT TCGATGTTTC TACCATAGAA TCTATTGGTG GTGGCTCGGT TCGCTGTATG
TTGGGTGAGG TATTTTTGCC TAGTCGACAA GCGGTGTTAT AA
|
|---|
| Protein sequence | MLLHESVTQF ANGKEESTQS AQRQTANCVV MVPPKEFRFN EETAQDNEFQ HKVALSQEEV
SRRVMAEFAS MVATLRQEGV QVVEFDYPAS DVSTPDAVFP NNWFSTTPDG TLYTFPMACE
NRQKEVRPDA LVAALAQAGR EVHRRSSLTE YLDEQAYLES TGVMVFDHLN KTVYAALSQR
CDRLVLEDYA DRIGYERVIS FQTRLPSGAP IYHTNVMMAV GEQFCVICDE VIPEFERRFV
MKSLAKDKQV ISISIEQMNH FCGNILQLET INGDKVIAMS QSAFDAFSPA QRNQLATHGK
LLPFDVSTIE SIGGGSVRCM LGEVFLPSRQ AVL
|
|---|
| |