| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000906 |
|---|
| Symbol | |
|---|
| ID | 8559219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1036221 |
|---|
| End bp | 1036841 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646408578 |
|---|
| Product | phosphoserine phosphatase |
|---|
| Protein accession | YP_003288057 |
|---|
| Protein GI | 262396204 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTCGATA CTACCAAGCC GTCACTGGCA CTGTTTGATT TTGATGGCAC CATTACCCGA
GAGGATATGT TTAGCCTTTT CTTACACTAT TCTGCTTATG GCCTGCGCAA GCGAGTAGGA
AAGGTCGCCA TCATGCCGTT TTATGCGCTG TACAAACTCG GAGTGTTACC CGCTCGTTTT
ATGCGTCCGC TCAGCAGTTT TATTGCATTT TCAGGGAAAG AAACGCAGCA AATTGAAGCG
ATTGGCGCTC AGTTTGCCCA TGAAGTGATC CCGCTGTACT TACGGCCAGA AGCGATGGAA
AGGTTGGCGT GGCATCAACA CAGAGGCGAT ACCATTGTGG TGGTGTCGGC ATCACTCAAT
GCGTATCTCA AGCCTTGGTG TGAAGCGAAC GGTTACCACT TGCTGTGCAG TGAACTGATC
TCAGAGCAGC CAAAACTGAG TGGCTTTTAC CAGCAAGGTG ATTGCAGTTT AGAAAGAAAA
GTCTCGCGCG TTAAGGCGGC GTTTTCGCTC GACGAGTTTG AGTCTATTTA TGCCTACGGT
GATACACACG AAGACATTCC GATGCTCAAA CTGGCAGACT ACGCGATGCT CAACTGGATC
GAGTGGAGAG CAAGCGAATA A
|
|---|
| Protein sequence | MLDTTKPSLA LFDFDGTITR EDMFSLFLHY SAYGLRKRVG KVAIMPFYAL YKLGVLPARF
MRPLSSFIAF SGKETQQIEA IGAQFAHEVI PLYLRPEAME RLAWHQHRGD TIVVVSASLN
AYLKPWCEAN GYHLLCSELI SEQPKLSGFY QQGDCSLERK VSRVKAAFSL DEFESIYAYG
DTHEDIPMLK LADYAMLNWI EWRASE
|
|---|
| |