| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000834 |
|---|
| Symbol | |
|---|
| ID | 8559140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 962033 |
|---|
| End bp | 962908 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646408499 |
|---|
| Product | putative permease of ABC transporter |
|---|
| Protein accession | YP_003287985 |
|---|
| Protein GI | 262396132 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.121337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGT TACGAGAGTT AGCGGTTAGC GGCGTTGAAG CTGGATGGTT AAGCGATAGC
TTTTCTTATG CCTTCATGGT GAACGCAATT GTGGCTGCGT TGATATTAGG ACCATTACTT
GGTGGTCTTG GTACATTAGT CATCGCCAAG CGACTGGCGT TTTTCTCCGA AGCAGTTGGC
CACGCAGCAC TGACGGGTAT CGCTATTGGT GTTTTACTTG GTGAACCGCC AGAAAACCCA
ATCATAGGGT TGTTTAGCTT CTGCATGATC TTTGCGTTGC TGCTGCACTT CGTGAGAAAT
CGCACCAATG TACCTTATGA CACGTTGGTC GGTGTATTTC TGGCGTTAGC TCTGGCGGTC
GGGGCGGCGT TGCTGATGTA CGTCGCACGT AAGATCAACA TACACATGCT AGAAAACGTA
CTGTTCGGTT CGATTTTGAC GGTGACCGAT AGAGACATCA CGTTGCTTGC AGTGAGCTGC
TTGATCATCC TGCTGCTGCT GATTCCAACA TTTAATCGCA TTTTGCTCAC GTGTATCAGC
CCAGATATTG CTCGCGTGCG TGGCTTCAAT ACCAGCTTTT ACGATTACCT ATTCGTCATG
ATGATCACTT TAGTGACGAT CGCCGCAGTG AAGATCATTG GTGCCGTGTT AGTAGGTGCC
CTGCTATTGA TCCCTGGTGC GACAGCTAGG TTGCTCACCA AGCGAATGGG AAGCTTTGTA
TTGCTTTCTT CTCTGCTTGC GACGGTTGCT TGCTTGGTTG GCACCATATT GCCAATGGAG
CTCGACTTAC CGGTGCCATC GGGCGCGTCG ATCATCATTG TTTCCGTTGC TTTCTTCTTA
ACTGCAACGG TTTATCGAAT TATTCGTAAG GCGTGA
|
|---|
| Protein sequence | MDWLRELAVS GVEAGWLSDS FSYAFMVNAI VAALILGPLL GGLGTLVIAK RLAFFSEAVG
HAALTGIAIG VLLGEPPENP IIGLFSFCMI FALLLHFVRN RTNVPYDTLV GVFLALALAV
GAALLMYVAR KINIHMLENV LFGSILTVTD RDITLLAVSC LIILLLLIPT FNRILLTCIS
PDIARVRGFN TSFYDYLFVM MITLVTIAAV KIIGAVLVGA LLLIPGATAR LLTKRMGSFV
LLSSLLATVA CLVGTILPME LDLPVPSGAS IIIVSVAFFL TATVYRIIRK A
|
|---|
| |