| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000726 |
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| Symbol | |
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| ID | 8559031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 839798 |
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| End bp | 840817 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646408390 |
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| Product | isopentenyl-diphosphate delta-isomerase FMN-dependent |
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| Protein accession | YP_003287877 |
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| Protein GI | 262396024 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCCGC AAACTAACCG AAAAGATTTA CATCTAGACG CTGTTTTACA TCATGACATG
AGCATGAAGC ATAAAACGGC GGGCTTTGAG TCTGTCGAGT TTGAACACTG CGCGCTGCCA
GAATGTGACT TTCAGGCGAT CGACCTGTCG ACAGAGTTTC TTGGCCACCG ATTGGCGCTG
CCGTTTTTGA TTAGCTCAAT GACAGGTGGA GCAAAAGACG CAGAAGTGAT CAATTGTCGT
TTGGCTGAAG CTGCCAGTGA ATTAGGCATT GCGATGGGCG TGGGTTCGCA GCGTATTAGC
TTAGAAGAGC GCCAACACGC AGGTCTAGGC AAAACCATTC GTGATTTAGC CAAAGATGTG
CCGCTTTATT CCAACCTTGG AGCCGCTCAA TTGCGCGACA AAGGTAAACT TGATAATGCG
CAGCGTGCGG TTGAATCCAT TCAAGCGGAT GCGTTGTTTG TACACGTAAA CCCAATGCAG
GAAGCGTTTC AGAAAAATGG CGACCATAAT TGGATTGGGG TCTTACACGC TATCGAGCAG
CTTAAATCTC GCGTGAATGT TCCGATCATT ATTAAAGAAG TCGGTTTTGG TATTAGTGGT
CACGTTGCGC AGCGATTGGT TGACGCCGGT GTGGATGCCA TTGACGTAGC GGGCGCGGGT
GGCACAAGTT GGAGCGCGGT TGAAGGCTAT TGCCAAGATA ACCCGAAAAT GCAGCGTGCA
GCCGAACTTT TCCGCGATTG GGGCATCCCA ACGGCAAAAT GTTTGACTCA AATACGAGCA
CAGCATCCTA CATTACCTTT GATCGCCTCA GGTGGTGTGC ATAACGGACT TGAAGCGGCG
AAAGCCATAC ATTTGGGCGC CAATCTCGTT GGGCAAGCGG GCGCAGTCTT GAAAGCGGCT
ACCATAAGCA CTCAAGCGGT GGTCGAGCAC TTTGAGCAAA TGGCGTTAGA GTTACGTTTA
TCATGTTTTG GTACGGGGTC TTCTAAGATC AGCGCATTAA CGCAAGCGCG CTGCCTATAG
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| Protein sequence | MAPQTNRKDL HLDAVLHHDM SMKHKTAGFE SVEFEHCALP ECDFQAIDLS TEFLGHRLAL
PFLISSMTGG AKDAEVINCR LAEAASELGI AMGVGSQRIS LEERQHAGLG KTIRDLAKDV
PLYSNLGAAQ LRDKGKLDNA QRAVESIQAD ALFVHVNPMQ EAFQKNGDHN WIGVLHAIEQ
LKSRVNVPII IKEVGFGISG HVAQRLVDAG VDAIDVAGAG GTSWSAVEGY CQDNPKMQRA
AELFRDWGIP TAKCLTQIRA QHPTLPLIAS GGVHNGLEAA KAIHLGANLV GQAGAVLKAA
TISTQAVVEH FEQMALELRL SCFGTGSSKI SALTQARCL
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