Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000673 |
Symbol | |
ID | 8558978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 783442 |
End bp | 784287 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646408337 |
Product | TPR repeat containing protein |
Protein accession | YP_003287824 |
Protein GI | 262395971 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0271673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTAT TTATTGGTAT TTTTTTCTCG CTGATACTTG CCTTGCCGAC GATGGCATCG GACGAAAAGT ATTCAGAATC GGATCTGTTA GATAGACCAT TAATGGAACG CTATATTTTA GATGAGCTAA AAGCACTGCG TCAGGACTAT CAGAGCCTAG AAAAACGAAT GATCACAGAG ATCACCGACC GCGAGCTGAC GGTTGCGGAT AAATCGTTGA ACTATGCCAA CGTGACCGTA ACCTACTTCT TCTACATCAT CGCAGGTGTC GCATCGCTGA TCGCCTTTGT AGGCTGGCAA TCTCTGCGTG AGTTTAAACA CAACACCAAA GAGATGGCGG ATAAACGATT AGAAAAGATC GCCCAAGAAT ACGAGAAGAA ATTTGTAGCA CTAGAGCGAG ATTTAAAACG CAAAACTCGC ATTATCAGTG AAAACAATAA AGAAATTGAG AAAATCAATG AGATCCATAA CTTATGGTTG CGTGCGCAAA GCTCACAAAC ACCAGAGCAA CGTATTGAAA TCTATGATGA GATCTTGCTG ATTCGCCCAG GTGATTTAGA AGCGTTGACT TACAAAGCAG ATGCCGCGAT GGAAATCAAC GAATACCACT GGGCACTTAG CATCTGTAAC CGCGTACTTG AAGTCGATTA CACCAATGGT CCTGCACTGT ATCAACGTGC TTGTGCATAC TCTCGTCTTG GCATTGAAGA GCAAGCCATT GAAGACTTGG AACGCGCTAT TGAATACAGC CCATCTATTC GTGACTTGCT TGCCGAAGAG CGAGACCTCG AATTGCTGCA TGGTAACGAG CGCTTTGAAA AGCTCTTACA CCTAGCAAAC GAATAA
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Protein sequence | MRLFIGIFFS LILALPTMAS DEKYSESDLL DRPLMERYIL DELKALRQDY QSLEKRMITE ITDRELTVAD KSLNYANVTV TYFFYIIAGV ASLIAFVGWQ SLREFKHNTK EMADKRLEKI AQEYEKKFVA LERDLKRKTR IISENNKEIE KINEIHNLWL RAQSSQTPEQ RIEIYDEILL IRPGDLEALT YKADAAMEIN EYHWALSICN RVLEVDYTNG PALYQRACAY SRLGIEEQAI EDLERAIEYS PSIRDLLAEE RDLELLHGNE RFEKLLHLAN E
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