Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000620 |
Symbol | |
ID | 8558925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 719526 |
End bp | 722405 |
Gene Length | 2880 bp |
Protein Length | 959 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646408284 |
Product | hypothetical protein |
Protein accession | YP_003287771 |
Protein GI | 262395918 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGA GTTTTATTGC GCTTGCTGTC GCGTCTTGTA TTGGTCTTGC TGGATGTGGA TCAGATTCTT CTGATGCGCC TGTGCCGGTC GACAAACCAA TTATTTCAGC CGACTTATAT TTACGTGGTT TAAATGGGGA TTGGGGCACG GCAGAGCATG CCAAGCTAAA CTATTTGGGT AATAACGAGT ACGAAACCGT ACTGCGCGTC GCTCGAGGTA GCAATCAGTT CAAGATTGCT GATCCGGGTT GGCAGATCCA ATACACCTAT TTTGAGGAGC CCGCGGCGTT CGATAAAGCT CAGGAGTACC TGCCAAAACC AGACACGAAT GAAGCGTGTA TGAACGATGA TTGTAACTCT GAGATCACGT TTGAAGACAA AGGGTATTAC AAGTTTTCTG TGAGCTTTGC CGATGAAAGT CGCGCGACAA TGACTGTGAC AAAAGCAACG CAAGAAGAAG CGGAAAAATA CTACTCTGAT GCGATTCTCG ACCCTGCAAT GGTGCATGAA GGGCATCAGA GTAAAGAAGT GAAACTGTTC GCCAATTACG ATGACTCGAG TGATACCGTG ATTTTCTCGG TGAAAGACCC AAAAGCCAAG CAGCGTGAAT TTGGTATTTC AACGACGACA GAATTGCGTG ATGCGCTCGA CCAAGGCTTA GTGATTAATG AACAAACAGG GCCGCGAGTG GTGTCGGGTG ATGTCGCGTT TGACGCGTTG TTTGCGTTGA CGATGAAAGA GCTAGACCAG CTTGCTGTTT CTGAAATCAA AGACGGCAAT TACAACTACA ACAACCCAAT CAAAGCGGAA GTTTTTGAGA CGGGCGCGAA GTGGCATTAC GTGTGGACGC GTGATTTGGC GTACGCAGCA GACCTTTCGC TTGCATTGAT GAATCCAACT CGCGTGCAAA ATGGTTTGAA TTTCAAATTG TCCGCTTTCC GCGACACGAC CGATCAGAAA TACGATGGCG AGCAGATTGT GCAAGACACG GGCACTGGCG GCAGCTGGCC AATCAGTACC GACCGCACGA CTTGGGCGCT TGGTGCAGAA CGCTTACTTT CGGCATTGGA TGGAGAAGAG TACAACCAGT TTGCTGAGCG CGCATATAAC GCTATCAGCA ATACACTTGA AGCCGATCGC CTGGCGGCTT TTGATGCGAA ATCTGGTTTA TACACTGGTG AGCAGTCATT CCTTGATTGG CGTGAGCAAA CGTATTCAAT GTGGACGCCA AACGATGTCA ATGCGATTGG TAGCAGCAAA GCGTTATCGA CAAACGTGGT TCACTACCGT GCAATTCAGC TCGCGGCTAA GTTGGCAGAG AAGTACGATT CAACTAACGC GGTCAAATAC ACTGAATGGG CTGAGCAGTT AAAAACCGCT ATCAACGAGC AGTTTTGGAA TGCCGAACGC GGTATGTACG TAAGTTATTT GTTTGATAAT GGCAAAGATA TCGCGGTCGA CAAATACGAC ATGCTGGGTG AAGCGTTGGC GATCATCAGT GGCGTGGCAA GTGATGCGCA GGCGAAACAA ATCATGGCCA ATTACCCACA CAGTGAGTTT GGCGTGCCGG TTTATTTCCC TCAACAACCA GACGTGCCTG TGTACCATAA CCGCGCAATT TGGCCATTTG TTACCGCGTA CAGCTTGCGC GCCGCGCATC AAACACAAAA CGTGGCTGCG GCGAACAATG CCATTCAATC GTTGGTTCGT GGTACAGCGA CTAATTTATC CAACATGGAA AACTTAGAGT GGCTTTCTGG TAAGTCATTC ATCATCCATA GTGATCATGG CGAAGATCCG AGCTTGGATG GCCCAGTGAT TAACTCTCAG CGTCAGCTTT GGTCTGTGGG TGGCTACTTG AACATGGTGG TAGAGACCCT ATTTGGCATC CATACCGAAA CAGGTAAGTT GGAAGTGAAG CCATTTATCA CAAGTTGGGT GCGCAATAAC TTGTTGGCTC AGTCTGAACA AATCACGTTG GAAAACTTTG CCTTCAAAGG AAAAAACTAC TCGGTAACGA TTGACTTGCC TGAAGTAAGC AAAGATGAAA CAGGCTACTA CCCAGTTGAA AATGTCACGA TGGACGAAGA GGGGCATTTC CACGTGACAA TGGGCGCGCT TGTGAATGTA GATAGCAGCA TTACTTTAGT TTCTGGTGTG AAACCGTATG TGAGTGAAGA CAGCCGCGTT TATTCTCCGC AAGAGCCAAC ATTGGTGGTA ACAAGCGTTG ATAATTCGGT TTCGATTGAC GTGACGAGCA AGTACAACGT GAACTTGTAT CGCAATGGCG AGCTGATTCA AAAGAACGTG ATTGCTCAAT CTTATTCCGA TACGCCAACA GGTTTTGCTT GTTATTTGGC TGAAAGCATT AACGATAAAG GCTTCCGTTC TAACCCAAGC CAACCGGCTT GTGTCGGTGA AGAGATCCGC ATCAAACTTG ATGGCGAATA TCAGCCACTC AAAGACAATG TCTCAGTGGT TACGGTGAGC AAAGACAGTG GCATCGTAAA GGGTGCAGAG TCGTTTACAG CTCCTGTAAC GGGCACTTAC CAGTTCGATG CTTGGTACAA CAATAACCTA GGACAACTTA ATACCGGCAT TACGAACACC GTGAAATTGT TAGAGGTATT GGATGATGCA GGTAAAGTGG TTGGTCAAGG TTACTTGCAG ATGGGCCATA TTGGTGAAAA CCAAGGTATG CGTTACTCAA CGCCAATTGA AGTGGCGTTG GAGCAGGGGA AAACCTATCA GATCGCGCTG AAGGACCACT TCAATATGAG TTACCTCACA TCGAATGAAA CCTACATCTA CGCTGGTGGT ATTGAGGGTG AAAAGAACGA AGCGCAAATC GCAGATATTC GAATCACACC TTTAATGTAG
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Protein sequence | MKPSFIALAV ASCIGLAGCG SDSSDAPVPV DKPIISADLY LRGLNGDWGT AEHAKLNYLG NNEYETVLRV ARGSNQFKIA DPGWQIQYTY FEEPAAFDKA QEYLPKPDTN EACMNDDCNS EITFEDKGYY KFSVSFADES RATMTVTKAT QEEAEKYYSD AILDPAMVHE GHQSKEVKLF ANYDDSSDTV IFSVKDPKAK QREFGISTTT ELRDALDQGL VINEQTGPRV VSGDVAFDAL FALTMKELDQ LAVSEIKDGN YNYNNPIKAE VFETGAKWHY VWTRDLAYAA DLSLALMNPT RVQNGLNFKL SAFRDTTDQK YDGEQIVQDT GTGGSWPIST DRTTWALGAE RLLSALDGEE YNQFAERAYN AISNTLEADR LAAFDAKSGL YTGEQSFLDW REQTYSMWTP NDVNAIGSSK ALSTNVVHYR AIQLAAKLAE KYDSTNAVKY TEWAEQLKTA INEQFWNAER GMYVSYLFDN GKDIAVDKYD MLGEALAIIS GVASDAQAKQ IMANYPHSEF GVPVYFPQQP DVPVYHNRAI WPFVTAYSLR AAHQTQNVAA ANNAIQSLVR GTATNLSNME NLEWLSGKSF IIHSDHGEDP SLDGPVINSQ RQLWSVGGYL NMVVETLFGI HTETGKLEVK PFITSWVRNN LLAQSEQITL ENFAFKGKNY SVTIDLPEVS KDETGYYPVE NVTMDEEGHF HVTMGALVNV DSSITLVSGV KPYVSEDSRV YSPQEPTLVV TSVDNSVSID VTSKYNVNLY RNGELIQKNV IAQSYSDTPT GFACYLAESI NDKGFRSNPS QPACVGEEIR IKLDGEYQPL KDNVSVVTVS KDSGIVKGAE SFTAPVTGTY QFDAWYNNNL GQLNTGITNT VKLLEVLDDA GKVVGQGYLQ MGHIGENQGM RYSTPIEVAL EQGKTYQIAL KDHFNMSYLT SNETYIYAGG IEGEKNEAQI ADIRITPLM
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