Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000430 |
Symbol | |
ID | 8558736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 488924 |
End bp | 490249 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646408096 |
Product | uncharacterized protein ImpJ/VasE |
Protein accession | YP_003287583 |
Protein GI | 262395730 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.959162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTTTAT ACAATCCAGT TGTTTGGCAA GATGGAATGT TCATGAAGCC GCAGCATTTT CAACAACTCG ATCGTTCGCA AAGTAAACTG TCGAGTATGT TGAGCAACAA CGCGTCTCCT TTACATTGGG GGATTAAGCG TTTGGAAATT AATTCACAAC TGCTAGCTCT CGGTAAAATT GGTATTACGC GTGCAGAAGG CATCCTACAG GACCGTACGC CATTTGAGCT TCCACTGCTC GCTGAACTAC CAGAAGTGAA AGATGTGGAT CCTTCGATTG CCGATAAAGT GGTTTATTTG TGCTGTCCGT TACCATCGGA ACGTTCTGAG TTATTTGGCA CTAAAAAAGA CGGTGCACGT TATACGATGG AATCTCAAGA AGCGGTTGAT GCTTGTTATG ATTCGGAAGA CATGGCAAAT ATCGTCGTCG GTAAGCTTAA CTTTTGCTTA ATGTACGACC ATGAAGATAA AAGTGCTTAC ACGTCTATTC CGATCCTCAA GATCTCTGAA GTGAAGCCAG ATGGCAGCGT GATCTTAGAT GATAGTTTCA TTCCTACCTG TATTGATATT CACGCATCTA CGGTACTTAA TAAGTTCGCG ACGGAGTTTG CTTCTATGCT CAAGCACCGC GCAGAATCCA TAGTTCAGCG ACTGGGAGTG GTGGATCAAC AAGGCGTATC ATCAGTTTCT GACTTTATGC TATTGCAAGC GCTCAATAGA TACGAACCCT TGTTTTGGCA TTTTGCAAAC ACAGAAGCTG TACACCCTGA GTCTTTGTAT CGAATTCTTC TTCAGGCAGA GGGCGAGCTT TCGACGCTGT GCTCGACGAC ACGCCGACCT ATTGAGTTTA CTAAATACAA TCATGGTGAT CTTACTAGCT GTCTTTCTCG CGTTCTAGAC AGTGCGAAAA TGACATTGAG CGTGATGTCT GAACAAAGAG CAATTCCACT GACCTTAAAA GATCAGAACT ATGGCATCAG AACGGCAGCG ATCCCTGACA ATAAGATCAT TGATACGACG ACCTTTATTC TTGCAGTTAA AGCCGACGTT ACCTTGGATG TCCTGCATAC GCAGTTTGTC AGCCAAACGA AGATCGGTTC AATCGATAAC ATTCGCGACT TGATTAACCT TCAACTGCCA GGGATTGAGA TCAAACCAAT GCCAGTTGTG CCACGCGCGC TGCCGTATCA CGCTGGCTAT ACCTATTTCG AGCTCGATAA AACGGGTGAA GAGTGGATGG CATTGAAGAA CACTGCTGCG ATTGCGATTC ACGTTGCGGG CGATTTCGCT AACTTATCAT TGCAACTTTG GGCCGTTCGT CTATGA
|
Protein sequence | MSLYNPVVWQ DGMFMKPQHF QQLDRSQSKL SSMLSNNASP LHWGIKRLEI NSQLLALGKI GITRAEGILQ DRTPFELPLL AELPEVKDVD PSIADKVVYL CCPLPSERSE LFGTKKDGAR YTMESQEAVD ACYDSEDMAN IVVGKLNFCL MYDHEDKSAY TSIPILKISE VKPDGSVILD DSFIPTCIDI HASTVLNKFA TEFASMLKHR AESIVQRLGV VDQQGVSSVS DFMLLQALNR YEPLFWHFAN TEAVHPESLY RILLQAEGEL STLCSTTRRP IEFTKYNHGD LTSCLSRVLD SAKMTLSVMS EQRAIPLTLK DQNYGIRTAA IPDNKIIDTT TFILAVKADV TLDVLHTQFV SQTKIGSIDN IRDLINLQLP GIEIKPMPVV PRALPYHAGY TYFELDKTGE EWMALKNTAA IAIHVAGDFA NLSLQLWAVR L
|
| |