Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000421 |
Symbol | |
ID | 8558727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 478009 |
End bp | 478995 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646408087 |
Product | transcriptional regulator |
Protein accession | YP_003287574 |
Protein GI | 262395721 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.423035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTGATAT ATACCGACCT AGTTGAAACA CTGTTGTTAT ACTGCAACAA TACTTTTTTG AATTACGCAG AAGTCATCAT GCAAACACAC ATCAACCTTG CGGATATCCG CTCTTTCGTC CTAATCGCTC AACTAGGAAA CTTCACGAAA GCAGCAGAGC AACTTGGCGT TTCTCGCTCA CACGTTTCAC GTCAAATAAC AAATCTGGAA CAACAGATTG GTGCCACTTT GCTACAAAGA ACCACTCGAA CACTGAAGCT CACCGAAGCA GGCAAGGTTC TGTATAAACA GTGTGAAACC GCCCTTCACA ATATTGATCA AGCTGTTATG GCAGTGGTTG ATGATGTAGA AGAATTAAGA GGCGAAATTC GTATCAACTG CGTGGGGGGG TATTTAGGGG AAGACGTTGT CGCAGATATC GTTGCTCAGT TTCTAATCCA ACACCCACAA GTGAACATTA ACTTAGATTT TAGCAGCCAT CGTGTCGATT TAATCGCGGA TGAATTCGAC ATCGCTTTTC GAATGGGAAA GTTAGACGAC TCCAACTTTA TCGCTCGCAA ACTGATTGAT GTGGAAATGG GGACGTACGC AAGCCCAAGT TATTTAGAAA CACATGGCTA TCCTTCGCAT CCAAAAGACT TAGAAAAACA CATTTGTTTG ACAGGTAGTG TGACACGCTG GGCATTCGAG AACACAAATA CAAAGCAGTC AACGGAACAC CAGATACGTG GACAGTTGCG ATGTAAGAGT GGCAGAGTAA TGATAAAAGC AGCGTTGGCT GGAAATGGTA TCATCCGTGT ACCAGCACTT TATTGCCAAC AAGAACTCCA GACAGGCAAG CTAAAAGAAG TGTTTACCGA CTGGAGCATT CCGAGTGTGG AGTTTTCACT CCTTTACCAT CACGACCGAC ATCAACCAAA ACGCATCCGA GCCTTTATTG ACTTTGCTAC TCAATATTTT CGTCAGCTGC CGAGTAAACA CAAGTAA
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Protein sequence | MLIYTDLVET LLLYCNNTFL NYAEVIMQTH INLADIRSFV LIAQLGNFTK AAEQLGVSRS HVSRQITNLE QQIGATLLQR TTRTLKLTEA GKVLYKQCET ALHNIDQAVM AVVDDVEELR GEIRINCVGG YLGEDVVADI VAQFLIQHPQ VNINLDFSSH RVDLIADEFD IAFRMGKLDD SNFIARKLID VEMGTYASPS YLETHGYPSH PKDLEKHICL TGSVTRWAFE NTNTKQSTEH QIRGQLRCKS GRVMIKAALA GNGIIRVPAL YCQQELQTGK LKEVFTDWSI PSVEFSLLYH HDRHQPKRIR AFIDFATQYF RQLPSKHK
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