| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000284 |
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| Symbol | |
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| ID | 8558589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 304065 |
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| End bp | 305426 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646407949 |
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| Product | putative two-component response regulator and GGDEF family protein YeaJ |
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| Protein accession | YP_003287437 |
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| Protein GI | 262395584 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.46829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTAA GAAGTTTTGT TTCTTCTTTT GCGGTTGCGA TGTTGTTATT TATTGTATCG
GTGACCATGA TTGGTGCTGT ACTCATCTCT TATGAGGAGA AGCAATTTAA TACGTACGCT
AACAATTTAG CAAAAACAAA GCAGAAGGTC ATTCTGCTAG GCTTGTTGAC CGAAGCTCAA
TTGGCGCAGT ATGAAAACTT CAGTATCGAA CAAATAGAAG TACTGACTGA CTTCAGTTTT
CAAGATGCAA TTTATGCTTT AAAGCCGTAT AAAAACCTAG ATTATGTGGA AACTGTTGCT
CGTAAAGCAC TACACCAAGC AGAAGCTCAT TTGTCCAATG TCTACGATAG AGAAGACGCC
ATATTGTACT TTCGTTCTTA CACTAGTGAC AAACTCATCT TAGAACGACC AATCCCAGCT
CTAGAGGGAT CTAAAGAGAC GTTTGATATA GAATGGTGCA GAGTGAATTA CGCTTGTATT
CTTGCCGCGT GGAAAGAGCA GCTCTCCGAC CGAGTTCTTA TCTCTAAGCC CTTCAAAACC
ACGTATTCAG ATGAGATGGC ATTAAGTATC ATGAGTCCCG TCTACTATAG AGGGAAGCTT
GTCGGCGAAT TTTCGGAACA ACTGTATTTA TCATCGCTTT ATAATGAAGG CAAAGCCGTT
GACGTAGAGG TTAGTAACGG AAATAAGCAG ATAATTATTT ACTTTCCGAG CTACCCCTTA
GCTCATTTTG CTTACACTCA ATCCTATGTT GCCGACAATA ATAATCTTGT TATTTACCAA
TATCCGTTTA GTAAAATAGT GGTGGACTAC AGCTTTATTC TTGTCATCTA TTCTGTCGTA
GCGTTCGCCT ATTATCGAAA AGCCAATGAA TCTAAACAGA GCAAAATTCA ATTAGAAAAT
GCTCTGAGTG ATGTAACGCA AGATGACTTG ACCGGATTAT TAAATCGGCG AGTATTTAAA
GAAGAGCGGT TTAAACATCG AATGGAGGTT GAACCATACT CTATCATTGC GATTGACGGA
AATCGTATCA AGAAGATTAA TGATCGTTAC GGACACCATG TTGGCGATGA AGTCATTGTT
ATTATTGCAG ACTCAATGAG AAAGGTTTTT CGGAACAGTG ACTACTTAGT CAGGACTGGT
GGTGATGAGT TTATTGTAAT TTTGCCCGGA TGCAGCATGA GCAAAGCTTC CATGTTAGCG
AAAAAGCTCC GTGGCGTTGT TAAACACAAT CGTTTAAATA CATTAGATAT AGAGATCAGC
GTTAGTACTG GTGTTGCTGT GCGCGAAGAG GATGAAACGC TGCAAGAGGT GATCGTGAGA
GCAGATGAAG AGTTATATGA AATGAAAAAA CAGCGTGTTT GA
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| Protein sequence | MNVRSFVSSF AVAMLLFIVS VTMIGAVLIS YEEKQFNTYA NNLAKTKQKV ILLGLLTEAQ
LAQYENFSIE QIEVLTDFSF QDAIYALKPY KNLDYVETVA RKALHQAEAH LSNVYDREDA
ILYFRSYTSD KLILERPIPA LEGSKETFDI EWCRVNYACI LAAWKEQLSD RVLISKPFKT
TYSDEMALSI MSPVYYRGKL VGEFSEQLYL SSLYNEGKAV DVEVSNGNKQ IIIYFPSYPL
AHFAYTQSYV ADNNNLVIYQ YPFSKIVVDY SFILVIYSVV AFAYYRKANE SKQSKIQLEN
ALSDVTQDDL TGLLNRRVFK EERFKHRMEV EPYSIIAIDG NRIKKINDRY GHHVGDEVIV
IIADSMRKVF RNSDYLVRTG GDEFIVILPG CSMSKASMLA KKLRGVVKHN RLNTLDIEIS
VSTGVAVREE DETLQEVIVR ADEELYEMKK QRV
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