Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000199 |
Symbol | |
ID | 8558504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 214156 |
End bp | 215415 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646407864 |
Product | ATP-dependent RNA helicase |
Protein accession | YP_003287352 |
Protein GI | 262395499 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00545239 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTTA ATTTTGCTGA CTTAGGCATT GAACAAAAGC TAATCGAGAC GCTAAGCAAT CTAAATATCG TGACGCCAAC ACCAGTGCAA GAAAAGTCTA TTCCACATGT CCTTGAAGGA AAGAACTTAC TTGCTGCTGC ACAAACTGGT ACGGGGAAAA CAGCTGCGTT TGGTTTACCT ATTATACAAA CCGTTCAGCA AAAGAAACTC AACGGTACGC CTCAAGCATT GGTTTTGGTT CCAACACGCG AGCTTGCGCA GCAGGTATTT GATAATTTGA ATCAGTACTC TGCACAAACC GAACTTCGCA TTGTGTGTGT TTATGGTGGT ACAAGCATTG GCGTACAAAA GAGGAAGTTA GAAGAGGGCG CTGATATTTT GATTGCAACA CCAGGTCGCC TTTTGGATCA TCTGTTTAAT GGCAACGTAA ACATCTCCAA AACCAGTATG CTCGTTCTAG ACGAAGCCGA CCGTATGTTA GATATGGGAT TCTGGCCTGA CTTGCAACGC ATCTTCCGAC GTTTACCCGC CGAAAAACAG ATCCTGTTGT TCTCTGCGAC ATTTGAAAAG CGAATCAAGA CTATTGCGTA CAAACTCATG GAATCGCCGG TTGAAGTTGA AGTGTCACCA GCAAACACGA CGGCTGAAAC AGTAAAACAG ATGGTTTATC CGGTAGACAA AAAGCGTAAA CGTGAATTAT TGGCGTACTT GATTGGCTCG CGCAATTGGC AGCAAGTGCT TGTATTTACA AAAACTAAGC AAGGTAGCGA TGAGCTAGCA AAAGAGCTTA AGTTAGATGG CATAAAAGCG GTTTCAATTA ACGGGGATAA GTCACAGGGT GCGCGTCAAA GAGCGTTGGA TGAGTTCAAG CAAGGTAAGG TGCGTGCGTT GATTGCGACA GATGTAGCAG CACGAGGACT GGATATTCAA GAGTTAGAGC AAGTGGTGAA CTTTGATATG CCATTTAAAG CCGAAGATTA TGTCCACCGT ATAGGCCGTA CTGGCCGTGC AGGAAAGTCG GGGTTAGCTG TGTCTCTAAT GAGTCGAGAT GAAGAATATT TATTGCATGC TATCGAGAAT TTGCTTGATC AACGCCTACC GCAAGAATGG TTGGCAGGCT TCGAGCCAAC TCTTATAGAA GAAGTCGAGC CTGAGAAAAA TGGTAGTGGG CGCCGTCGAA GCCGTTCATC AGAGAAGCGT AAGCTAAAAG CAAAATTAGC GATTCATAAG AACCGTGGTA AATCACGTAA CTCTCGCTAA
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Protein sequence | MSVNFADLGI EQKLIETLSN LNIVTPTPVQ EKSIPHVLEG KNLLAAAQTG TGKTAAFGLP IIQTVQQKKL NGTPQALVLV PTRELAQQVF DNLNQYSAQT ELRIVCVYGG TSIGVQKRKL EEGADILIAT PGRLLDHLFN GNVNISKTSM LVLDEADRML DMGFWPDLQR IFRRLPAEKQ ILLFSATFEK RIKTIAYKLM ESPVEVEVSP ANTTAETVKQ MVYPVDKKRK RELLAYLIGS RNWQQVLVFT KTKQGSDELA KELKLDGIKA VSINGDKSQG ARQRALDEFK QGKVRALIAT DVAARGLDIQ ELEQVVNFDM PFKAEDYVHR IGRTGRAGKS GLAVSLMSRD EEYLLHAIEN LLDQRLPQEW LAGFEPTLIE EVEPEKNGSG RRRSRSSEKR KLKAKLAIHK NRGKSRNSR
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