Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000082 |
Symbol | |
ID | 8558387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 91288 |
End bp | 92448 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646407747 |
Product | permease |
Protein accession | YP_003287235 |
Protein GI | 262395382 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0172441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAAAACA CAGTCGTTCC TGCAGCATCA CCACGAGTTA CAGTTCCAGT CGTCGCACTG TCTCTTTATG CGGTGGCTTC GGGCTATTTA ATGAGCTTGA TCCCTCTCAT GCTCGGTGAA TACAACATCT CAGCAGATTA TGCGAGTTGG TTGGCGAGTG TTTTTTATGG CGGCTTATTG GTCGGCGCGA TGTTTATTGA GCGTGTCGTG CGTCAAGTTG GTCACCGTAA AGCGTTTATT GGCTGCTTAG CGGCATTCTC GCTAACGATT GTCACGCTAC CCGTTTTTGC TAATGGGTTA GTGTGGCTTG CTGCTCGTTT TATCGCAGGT ATTGCCGTTG CGGGCGTTTT TGTCATTGTT GAATCTTGGC TAATGTCTGG CGACGAAGCA TCGCGTGCAA AGCGTTTGAG TTTATACATG CTATCGCTTT ATGGCGGTTC TGCATTAGGC CAATTTGGCA TTGGTGTACT TGGCGTAAGT GGCGGTGTTC CGTTCATTGC AATCACAACT CTGATCCTAA TGGCGATGTT GGTGCTAATG TTTATTGAGT GTGAACAACC AAACAGCCAT GAATCAACCG CTTTGTCATT TAAGCAAATC GCCAAGCTAA ACCATGCTGC AATTATTGGT TGTGTTGTAT CAGGTTTGAC CTTAGGCGCG ATCTACGGAT TAATGCCTGT TGAGCTAACT AACCGTAAAA TCAACCATCA AGACATTGGT ACATTGATGG CATTAGTGAT CCTAGGTGGC ATGTTGGTTC AACCAATGGT GACCACATTG AACAAATACA TGAGCCGCAC AGTGCTAATG GCGTTCTTCT GTATTTTGGG TATTTTTTCG ATCGGTTTGA CCTTTATTTC ATCATCAGCC GTGGTATTAG CTGCTGCTTT ATTCTTTTTA GGTGCAGCTA CTTTTGCCTT GTACCCAATT GCGATCAACT TAGGTTGCGA AGGACTTGAT GAGCGCTTTA TTGTCTCTGC CACACAAGTC ATGCTGTTTA GCTACAGCAT TGGCTCTGTT GCTGGCCCGG TTGTGGCTGA TAAATTTATG GGCCAAGAAC ATGGCTTACT AGGCTACTTG TTTGCCGCTT TAGTTGCGAC TGGCGTATAC ATGCTACTTG CAGCGAGCAA AACTAAGCAG CGTATGGCCG CTGGCCTCTA A
|
Protein sequence | MENTVVPAAS PRVTVPVVAL SLYAVASGYL MSLIPLMLGE YNISADYASW LASVFYGGLL VGAMFIERVV RQVGHRKAFI GCLAAFSLTI VTLPVFANGL VWLAARFIAG IAVAGVFVIV ESWLMSGDEA SRAKRLSLYM LSLYGGSALG QFGIGVLGVS GGVPFIAITT LILMAMLVLM FIECEQPNSH ESTALSFKQI AKLNHAAIIG CVVSGLTLGA IYGLMPVELT NRKINHQDIG TLMALVILGG MLVQPMVTTL NKYMSRTVLM AFFCILGIFS IGLTFISSSA VVLAAALFFL GAATFALYPI AINLGCEGLD ERFIVSATQV MLFSYSIGSV AGPVVADKFM GQEHGLLGYL FAALVATGVY MLLAASKTKQ RMAAGL
|
| |