| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2811 |
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| Symbol | |
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| ID | 5135883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2957892 |
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| End bp | 2959685 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640534255 |
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| Product | hypothetical protein |
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| Protein accession | YP_001218661 |
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| Protein GI | 147675121 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTGCA TGGCAACTTT GCTGTTAAGT GGCACTCGGT TGGAACCTCA CGCTCCGAAC
CTACCACTCA ATAAACCGTT TCTTTTTGCC TTGGCCGTGG TTTATCTGCT CGCCATGCAT
TTCTTTATGC CTAACCCCGG CGGTGCTGGA CTGGCACTCT CCTTCAATAC TACGGTCTGG
ATCGCGACCA GCATAACACT GGCGATTGGT CTGTATCAGT TGGCGAATAA TCAAGCGCTG
CGTTATTCCA AGCTGACCAC TGGACTTTGG TTAAGCTGTG CTCTGCTAAC CCTACCCATC
ACTTACTCGA ATGCCGATTG GTTTCATACT CTTGGCCGCT TAGTGGGTCT CTGGGCTGGA
TTTACTCTGT TTCTCGTCTT ACAACAATTT CGCTTTAGCA ACAAACATAA ACAGCGTTTG
ATGTGGTTTA TTCTACTGGG TAGCGTCATT GAAGCCGTGA TCGGTTTAAT TCAATACTTT
TGGTTAGAGC CGGGTAACCC CTTTGGTTAT GACACCGAAG CAAATCGACC GTATGGTATT
TTCCAGCAGC CAAATGTGAT GGCCAGTTTC CTCGCAACAG GGCTGGTGTT GTCAGGTTAT
TTGCTGGCCA GACAACCGGA AAAATATGAC TCGCGCTGGA GCAAAATCGG CATCCTTTAC
GCGACACCGC TACTCACGGC TCCCTTACTG GTCGTACTCG CCTCTCGCAC TGGGTGGCTG
GCCAGTTTAT TGAGTATCGC TCTGGTTGCC CCTTACTTAT ATCGATTCGC TTCACGTCGG
CGCTTTACGC TCTGGCTTCT TGCCATAACT CTTGGGATTT GTGCAGGTTT TACCGCTATG
TATGGCCAAG GAACCTCTGG TTTTGTCGCG AATAAGGCTG ACTTAGAAAG CCCACGTCGT
TTCACATTTC CACAAACCAT AGATATGATC ATCGAAAAGC CTTTTACAGG CTATGGTTAT
GGCAAATTTG AGGCGCAGTA TCTGCTTTAT ACTGCTCGCC AACATCAGTT AAATAGCAGC
TATCCAGCAG GCTTAGCATC GATGGATCAC CCACACAATG AGCTGTTGTA TTGGGGGGTA
GAAGGCGGAT TACTACCTGT AATGGGTATA TTACTCGCCG CCTGTTTTTG TGCTCTACGC
ATTTATGCCG CCAAACGTGG CACTCGCATG GCCATGCTGG CTCTGTTTGT GCCGATCACC
TTACACGCTC AATTGGAGTA TCCGTTTTAC CACTCCGCAA TTCACTGGAT CACCTTTATC
ATCCTAATCT ACTGGGTAGA TCAACGGGTC GCACGCTATC GACTGGCCAG TTTCACCACG
CTCACCAAAT CTTTATTGCG TATTACCAGC TTAGTGCTGC CGATTGTCAC CAGCTTGTAT
ATGGTCACAG CGTTACACAC CAACTATGTG TTAACGCAAT TTGAAAAATC TCAGCCACTC
AATCCTGAAT TGCTGAAAAA CGTGACTAAC CCATTGGTAT GGCAAGACCG ATTTGATTGG
GATATCTACA GCACCTATCT GAACATCGGG CTCCATGAAC AAAAAGCGGA GCTTATCCAA
CCCTATATCG ATTGGTCGTT ACAGATCATT CAACATAAAC CGCGCCCGGC CTTCTATTCA
AACCTGATTT TGGCTTATCA AGGTTTAGGC GATACGAGCC GTGCGCAGCA AATCCGCCGC
GAGGCCGAAT TTCTGTTCCC CAATCAAGAT TTCAGTACAG TCCAGTACCA CCCCTCGATA
AAGGTCAACA GTGCCACATC TGATGCTGAG GTTCCCTCAG CCGCGACACC CTAA
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| Protein sequence | MNCMATLLLS GTRLEPHAPN LPLNKPFLFA LAVVYLLAMH FFMPNPGGAG LALSFNTTVW
IATSITLAIG LYQLANNQAL RYSKLTTGLW LSCALLTLPI TYSNADWFHT LGRLVGLWAG
FTLFLVLQQF RFSNKHKQRL MWFILLGSVI EAVIGLIQYF WLEPGNPFGY DTEANRPYGI
FQQPNVMASF LATGLVLSGY LLARQPEKYD SRWSKIGILY ATPLLTAPLL VVLASRTGWL
ASLLSIALVA PYLYRFASRR RFTLWLLAIT LGICAGFTAM YGQGTSGFVA NKADLESPRR
FTFPQTIDMI IEKPFTGYGY GKFEAQYLLY TARQHQLNSS YPAGLASMDH PHNELLYWGV
EGGLLPVMGI LLAACFCALR IYAAKRGTRM AMLALFVPIT LHAQLEYPFY HSAIHWITFI
ILIYWVDQRV ARYRLASFTT LTKSLLRITS LVLPIVTSLY MVTALHTNYV LTQFEKSQPL
NPELLKNVTN PLVWQDRFDW DIYSTYLNIG LHEQKAELIQ PYIDWSLQII QHKPRPAFYS
NLILAYQGLG DTSRAQQIRR EAEFLFPNQD FSTVQYHPSI KVNSATSDAE VPSAATP
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