Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2492 |
Symbol | ilvA |
ID | 5137011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2644539 |
End bp | 2646071 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640533943 |
Product | threonine dehydratase |
Protein accession | YP_001218385 |
Protein GI | 147674902 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGTTAA CCAATCAAAC TGGCGCAGAG TATCTGCGCC AGATCTTGCG CTCTCCGGTG TATGAGGTAG CGAACGTCAC GCCATTGCAA ACCATGCCGC GTCTTTCGGC GCGGATTGGT AACCAAGTGC AGATCAAACG TGAAGATCGC CAGCCAGTAC ACTCGTTTAA ACTGCGCGGC GCTTACAACA TGGTGTCGCA CCTAACCGAA GCACAAAAAG CCGCGGGCGT AATTGCCGCT TCCGCAGGTA ATCATGCCCA AGGTATGGCG CTGTCAGGAA CGAAACTTGG CATCAAAACC ACCATCGTCA TGCCACGCAC CACGCCAGAC ATTAAAGTTG AAGCGGTACG CGGATTTGGC GGCGAAGTAC TGCTGCATGG CAGCAATTTC GATGAAGCCA AAGCCGAAGC CGAACGTTTA TCCAAAGAGC AAGGCTACAC CTTTGTACCT CCGTTCGATC ACCCTTTGGT GATTGCCGGT CAAGGCACGA TTGGCATGGA AATGCTGCAG CAAAACGGTC ATTTGGATTA CATTTTTGTG CCGGTCGGTG GCGGCGGTTT AGCGGCGGGA GTGGCGGTTC TGGTCAAACA GTTGATGCCG GAGATCCAAG TCATCGCGGT TGAACCGGAA GACTCAGCCT GCCTCAAAGC AGCCTTAGAT GCGGGTAAAC CTGTGGTGCT GGATCAAGTC AGCATGTTTG CTGATGGTGT GGCAGTAAAA CGAATTGGCG ATGAAACCTT TCGCCTTTGC CAGCAATACA TTGACGGCCA CGTGACGGTG TCCAGTGATG AAATCTGCGC GGCGGTGAAA GACATTTTTG AAGATACGCG CGCCATCGCT GAACCTTCTG GCGCATTGGC GCTGGCGGGA CTAAAGAAAT TTGCCGAACA GCAGCAGCTC AAAGGCAAAC AGTTGGGTAC GGTACTTTCT GGCGCCAACA CCAACTTCCA CGGTTTGCGT TATGTGTCGG AGCGCTGCGA ACTGGGTGAA AAACGCGAAG GCTTACTGGC GGTGACCATT CCAGAGCGCA AAGGGGCGTT TTTCGACTTC TGCCAAATTA TTGGTAACCG CGCCGTCACC GAATTTAACT ACCGTTACAA TGATGATCAA CTGGCCAATA TTTTTGTCGG TGTGCGTTTA GTCGGCGGCC CAGATGAGCT GAAATCGATC ATTCACGAGC TGCGCCAATC CGGCTATCCG GTGCAAGATC TCTCGGATGA TGAAATGGCC AAGCTACACA TTCGCTACAT GATTGGTGGT CGCCCTTCCA AACCACTGAC CGAGCGTTTG TACAGCTTTG AGTTTCCTGA ATACCCCGGC GCACTGCTCA AATTCTTGAG CATGCTCGGC ACCCACTGGA ACATCAGCTT GTTCAACTAC CGCAACCACG GCGCAGACTA CGGCCGCGTG CTGTGTGGTT TTGAACTGGA TACACCAGAC CTAGTGCGCT TTTCAGAGCA TTTGGTTGAA CTCGGTTATC GCTATAAAGA TGAAACCGAT AACCCTGCGT ATCGTTTCTT CCTAGCTAAA TAA
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Protein sequence | MGLTNQTGAE YLRQILRSPV YEVANVTPLQ TMPRLSARIG NQVQIKREDR QPVHSFKLRG AYNMVSHLTE AQKAAGVIAA SAGNHAQGMA LSGTKLGIKT TIVMPRTTPD IKVEAVRGFG GEVLLHGSNF DEAKAEAERL SKEQGYTFVP PFDHPLVIAG QGTIGMEMLQ QNGHLDYIFV PVGGGGLAAG VAVLVKQLMP EIQVIAVEPE DSACLKAALD AGKPVVLDQV SMFADGVAVK RIGDETFRLC QQYIDGHVTV SSDEICAAVK DIFEDTRAIA EPSGALALAG LKKFAEQQQL KGKQLGTVLS GANTNFHGLR YVSERCELGE KREGLLAVTI PERKGAFFDF CQIIGNRAVT EFNYRYNDDQ LANIFVGVRL VGGPDELKSI IHELRQSGYP VQDLSDDEMA KLHIRYMIGG RPSKPLTERL YSFEFPEYPG ALLKFLSMLG THWNISLFNY RNHGADYGRV LCGFELDTPD LVRFSEHLVE LGYRYKDETD NPAYRFFLAK
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