| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2290 |
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| Symbol | bioH |
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| ID | 5137008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2446952 |
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| End bp | 2447758 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640533746 |
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| Product | bioH protein |
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| Protein accession | YP_001218206 |
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| Protein GI | 147674258 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAGAGT GGATGAAGAT GGAAATAGAC GGAGAAACTG TGACCATGGC GTTGTATTGG
CAAGTCAGTG GACAAGGGCA AGATCTGGTA TTGGTACACG GCTGGGGCAT GAACGGGGCG
GTATGGCAGC AAACCGCACA AGCCTTGAGT GACCATTTTC GAGTGCATGT GGTGGACTTA
CCCGGTTATG GTCATAGTGC CGAGCAACAT GCCGCAAGCT TAGAAGAGAT TGCTCAAGCC
TTGTTAGAGC ATGCACCGCG CAACGCCATT TGGGTCGGCT GGTCACTGGG TGGCTTAGTC
GCCACGCACA TGGCGCTGCA TCATTCAGAC TATGTCAGCA AATTGGTGAC GGTCGCTTCC
TCGCCCAAAT TTGCGGCGCA GGGCAGCTGG CGTGGTATTC AACCGGATGT GCTGACCGCG
TTTACCGATC AGTTGGTGGC CGATTTTCAG CTGACCATTG AGCGCTTTAT GGCGCTGCAA
GCCATGGGTA GCCCAAGTGC GCGCCAAGAT GTGAAAGTGC TTAAACAGGC TGTGCTGTCG
CGCCCTATGC CTAATCCACA ATCATTGCTC GCAGGGCTGA CGATGCTCGC CGAAGTCGAT
TTGCGTGATG AGCTGCAACA CATCAGCGTG CCTATGCTGC GGCTATATGG TCGGTTGGAT
GGGTTAGTCC CCGCGAAAGT CGCCCGTGAT TTGAACCATT TAGCGCCTTA CAGTGAAGCG
TTCATGTTTG ACCAATCTTC CCATGCGCCG TTTATGACCG AGGCGGAGGC GTTTTGTCAG
CAGCTTATCG AGTTTGCGAC TCGTTAG
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| Protein sequence | MAEWMKMEID GETVTMALYW QVSGQGQDLV LVHGWGMNGA VWQQTAQALS DHFRVHVVDL
PGYGHSAEQH AASLEEIAQA LLEHAPRNAI WVGWSLGGLV ATHMALHHSD YVSKLVTVAS
SPKFAAQGSW RGIQPDVLTA FTDQLVADFQ LTIERFMALQ AMGSPSARQD VKVLKQAVLS
RPMPNPQSLL AGLTMLAEVD LRDELQHISV PMLRLYGRLD GLVPAKVARD LNHLAPYSEA
FMFDQSSHAP FMTEAEAFCQ QLIEFATR
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