Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2273 |
Symbol | |
ID | 5136247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2423598 |
End bp | 2425751 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533729 |
Product | pullulanase |
Protein accession | YP_001218189 |
Protein GI | 147674082 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02103] alpha-1,6-glucosidases, pullulanase-type |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAGACC CTTACTCGCA CAGTTTGGCC ATCAATTCAC TCTACAGTCA GGTAGTGGAT CTCAATCATG CCGATCTCAA ACCTGAGGGC TGGGATACGT TAGCTGCGCC ACATCCACAA CACGAGCGTG CCGATTTTAT TTTGTATGAA GCTCACGTCC GTGATTTTTC TGCCCACGAC ACCACCGTCA CTTCGGCGCA CCGCGGTAAA TTTGCCGCCT TTAGCGAGCA AGAGAGTCAG CCCGTACAAC ATTTAAAACA GCTAGCTCGT TCTGGTGTGA CCCATCTGCA TTTGCTGCCC GTGTTTGATA TTGCCACCAT CAATGAAGAC CCAGAGCAAG TGGTCAATTT GGATCAGCCA TTTAGCCGTT TGTGTGATCT CAAACCCGTA CTCAAAAACG ACAGTGACTT AGCGGCTTAC TGCACTGGTA ATGACACACT GCAAAGCGTC TTTACCACGT TAAAAGCCAA AGACTCGAAA GAGCAGCCTC TCGTGCAGCG TTTAAATGGT TTTCTGCGTG ATGTGGATAG CTTCAACTGG GGCTATGATC CGTTCCACTA CACCGTGCCT GAAGGCTCGT ATGCCACTCA ACCTGACGGC GTTACCCGCA TCAAAGAATT TCGTGAGATG GTGCAAGCGG TCAAACAAGA GATTGGGATG AATGTGGTGA TGGATGTGGT TTACAACCAC ACCAACGAAG CGGGGGTTTC GGATAAATCG GTACTGGATC GCATCGTCCC TTGGTACTAC CAACGCTTGA ATGAGTGGAG TGGTCAGGTC GAGAATTCTA CTTGCTGCTC GAATACCGCA CCGGAAAATC GCATGTTTGC TAAGTTGATT GATGATTCGA TTCGTACTTG GGTTAAAGAG TACAAAATCG ATGCCTTCCG CTGGGATTTG ATGGGACATC ACCCACTGGC GCAAATTGAG CAAACCTTAA CGGCGGCCAA GCAAATCAAT CCTGATGTTT ACTTCTACGG CGAAGGTTGG AACTTTGGCG AAGTGGCGAA TGATCGCCAA TTCAAACAGG CAACCCAACC CAATTTGGCC GGAACGGGCA TTGGCTCGTT TTCAGATCGT CTGCGTGATG CCGTGCGCGG TGGCGGCCCA TTTGATGGCG AAGCGAGCCT ACGCGCTAAC CAAGGCTGGG GTAACGGTAT TTATGTGCAA AAAAATGATC TGAGCAACAA CACGCGAGCT CAAGCACTGC ACTTGGCAGA TTTAACTCGC CTTGGTATGG CTGGGAATTT AAAAGCCTTC ACCTTTATTG ACCAAACAGG CAACACCATC AAGGGCTCAG AACTCGACTA CAACGGCCAA GCGGCAGGTT ATGCCAATGA TGCATGGGAG ATCCAAAACT ATGTTTCTAA GCACGATAAC CAAACCTTGT GGGATAACCA GCAGTACAAA ATTGACTATG CGCTGCCACT ACACACTCGA GTGCACATGC AAGCGGTCAG CTTAGCGACG GCGGTATTAG GCCAAGGTGT GCCTTTTGTA CACATGGGAA GCGAGTTACT GCGTTCTAAA TCCATGCAGC GTGACTCTTA CGACTCTGGT GACTGGTATA ACCGCGTTGA TTTTAGCAAA ACCAGCAATA ACTGGAATGT GGGCCTGCCA CGTCAAGACA AGGACGGCAG CAACTGGTCG ATCATTGAAA CCGTGATTGC ACAAGCCGGA GCCAATGCCG AGCCACAAGC CGTCGACATT ACCACCATGA ATGATTATTT CAATGAATTG GTGCAACTGC GTCGCTCGTC ATCCCTACTC ACGTTAGGCA AAGGCAGTGA GATCATCAAA CGCGTCCATT TCCACAACAC AGGCAGTGAG CAAATTCCGG GCGTCATAGT GATGAGCATT GATAACCAAG GCGATCTGCA TGATGCTTCC CTCGATGCTG CGCGATCAGG CTTGGTGGTG GTACTCAACG CCAGCCCAAC ACCGCTCACC GAGTTTGCCC ACTTTGATGC CACCGATTAT CAGTTGCATG CCATTCAAGC GGATCTGGGT AATCGTTCCA TCGCTTATAA TGGCGTAGCC GCGAGCGTTG TTAACCAGCG ACTGAGCGTT CCTGCATGGT CAGTCGCCGT CTTTGAAAAA CGACATCCTA AAGTAAGGGG AAAGCTTTCG CATCCTCGAA TCAACAACAC CTAA
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Protein sequence | MTDPYSHSLA INSLYSQVVD LNHADLKPEG WDTLAAPHPQ HERADFILYE AHVRDFSAHD TTVTSAHRGK FAAFSEQESQ PVQHLKQLAR SGVTHLHLLP VFDIATINED PEQVVNLDQP FSRLCDLKPV LKNDSDLAAY CTGNDTLQSV FTTLKAKDSK EQPLVQRLNG FLRDVDSFNW GYDPFHYTVP EGSYATQPDG VTRIKEFREM VQAVKQEIGM NVVMDVVYNH TNEAGVSDKS VLDRIVPWYY QRLNEWSGQV ENSTCCSNTA PENRMFAKLI DDSIRTWVKE YKIDAFRWDL MGHHPLAQIE QTLTAAKQIN PDVYFYGEGW NFGEVANDRQ FKQATQPNLA GTGIGSFSDR LRDAVRGGGP FDGEASLRAN QGWGNGIYVQ KNDLSNNTRA QALHLADLTR LGMAGNLKAF TFIDQTGNTI KGSELDYNGQ AAGYANDAWE IQNYVSKHDN QTLWDNQQYK IDYALPLHTR VHMQAVSLAT AVLGQGVPFV HMGSELLRSK SMQRDSYDSG DWYNRVDFSK TSNNWNVGLP RQDKDGSNWS IIETVIAQAG ANAEPQAVDI TTMNDYFNEL VQLRRSSSLL TLGKGSEIIK RVHFHNTGSE QIPGVIVMSI DNQGDLHDAS LDAARSGLVV VLNASPTPLT EFAHFDATDY QLHAIQADLG NRSIAYNGVA ASVVNQRLSV PAWSVAVFEK RHPKVRGKLS HPRINNT
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