Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2131 |
Symbol | |
ID | 5136915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2288511 |
End bp | 2289227 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533587 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_001218047 |
Protein GI | 147674984 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCTC ACCGTTCTGA TCCTACTTCA TCCGTGATTG AGTTGAATGA TGTGGTGTTC TGTTGGCCGG GAGCCAGCTC ACCCACCTTG GATATTGCCC ATTTACAGAT TGCTCGGGGT GAACACCTGT TTGTCAAAGG CCCCAGTGGC TGCGGCAAGT CCACGTTACT TAGCCTTTTA ACTGGCATTA ATACCGCAAC ACAAGGTGTC GTCTCTTTAC TTGGCAGTGA CTTAAGCCGC TTGAGTGCCA GTCAGCGCGA TCGCTTCCGC GCCGACCATA TAGGCTATAT TTTCCAACAA TTTAATCTGC TGCCTTATCT GTCGGTGTTA GATAACGTGA CCTTACCATG CCACTTTTCC GCTTTGCGTA AACAGCAAGT GGATGATCCC TTATCGCACA AAGCGCAATC GCTGTTGGAA AGATTGCATC TGCCAAGCGC TTTACTGAAT AAACCCGTGA CCGAACTCAG TATCGGCCAG CAGCAACGCG TCGCCGCGGC GCGAGCACTG ATGGGTGAAC CGCAACTCAT CATCGCCGAC GAACCCACGT CTGCCCTCGA TTACGATAAC CGTGAAGCTT TTATTGCTCT GCTGCGTGAA GAAGCGGAGC GAGTCGGTTC CACTTTAGTT TTTGTTAGCC ATGACCCAAC ACTGGAAAAG CTTTTTGAGC GAAGTGTTCA CTTACCTACT CTCAATCGTG CAGGAGGTTG GCAATGA
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Protein sequence | MPAHRSDPTS SVIELNDVVF CWPGASSPTL DIAHLQIARG EHLFVKGPSG CGKSTLLSLL TGINTATQGV VSLLGSDLSR LSASQRDRFR ADHIGYIFQQ FNLLPYLSVL DNVTLPCHFS ALRKQQVDDP LSHKAQSLLE RLHLPSALLN KPVTELSIGQ QQRVAAARAL MGEPQLIIAD EPTSALDYDN REAFIALLRE EAERVGSTLV FVSHDPTLEK LFERSVHLPT LNRAGGWQ
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